Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1016 158 4e-33
seq806 102 2e-16
seq1204 84.2 6e-11
seq139 84.2 6e-11
>seq1016
Length=40071
Score = 158 bits (174), Expect = 4e-33
Identities = 364/546 (67%), Gaps = 7/546 (1%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || ||||||||| ||||||||| || || || || || | |||||||||
Sbjct 23037 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 22978
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 22977 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 22918
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || ||||| |||||| | | || || || |||| | | ||| |||
Sbjct 22917 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 22858
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
||| || || | || | ||||| | | || |||||||| |||| ||| || |
Sbjct 22857 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 22800
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|| || | ||| || || || | ||| || | || |||| ||| || |
Sbjct 22799 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 22740
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
||| | ||| | ||| ||||| ||||| | || |||||| | ||||| |
Sbjct 22739 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 22680
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
||||||| || || | ||| || | ||| | || |||||||| || || ||||
Sbjct 22679 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 22620
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| ||| | |||| |||||||| || ||||| || || || || || || ||||
Sbjct 22619 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 22560
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | |
Sbjct 22559 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 22500
Query 156163 AGCGAA 156168
|||||
Sbjct 22499 CGCGAA 22494
>seq806
Length=39577
Score = 102 bits (112), Expect = 2e-16
Identities = 107/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| ||||||||| | || ||||| |||||| | |||||||||
Sbjct 9432 AGAATTTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGATGACACACCAGCA 9376
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| || ||||| || | |||||| | |||||||||||| || |||||||
Sbjct 9375 AAGTGGAAGGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 9316
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| || ||
Sbjct 9315 ACGCCGACCATTTCACCAGG 9296
>seq1204
Length=58929
Score = 84.2 bits (92), Expect = 6e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995
|| |||||||| ||| ||| ||| || || ||||| || |||| ||||| |||
Sbjct 49948 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 50006
Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055
|| | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| |
Sbjct 50007 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 50065
Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115
| ||||| |||| || | ||| || | ||||||| || |||| || || ||||| |
Sbjct 50066 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 50125
Query 354116 CCTTCTGTCCGCCTGATAG 354134
||||||| || || || ||
Sbjct 50126 CCTTCTGACCACCGGAAAG 50144
>seq139
Length=43923
Score = 84.2 bits (92), Expect = 6e-11
Identities = 125/177 (71%), Gaps = 8/177 (5%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||||||||||| ||||| || |||||||| |||||||| || ||
Sbjct 17188 GCGCCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCGTCACGG 17247
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600
|| | |||||| | |||||||| || ||| | ||||||| | |||||
Sbjct 17248 GCACGACCCTCCACGGGCTGACGGGTCAGAATCTGAGTAGGACCACGAGCACGAGCG--- 17304
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| || | ||||| || |||||||||||| | | |||||| | |||
Sbjct 17305 -TGGATCTTGTCGTCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAAGAA 17360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471794386216847
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |