Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1016 143 3e-28 seq940 131 2e-24 seq1194 118 1e-20 seq1195 111 2e-18 seq1043 96.9 4e-14 >seq1016 Length=40071 Score = 143 bits (158), Expect = 3e-28 Identities = 291/435 (67%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||| ||||| ||||||||||||| | || | ||||||||||||| |||||| Sbjct 23033 ACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 22975 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||||| ||||||| |||| || ||||| |||| ||| Sbjct 22974 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 22915 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 ||| ||||| |||||| || | || | || |||| ||| | ||||||| Sbjct 22914 TCGAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATAGTCTTGCGGCCACGGCCCTCC 22858 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | | |||||| || ||||||||| Sbjct 22857 TGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGG 22798 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| ||||| ||||| | |||||| || || | | |||| ||| ||||| Sbjct 22797 GCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGA 22738 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 22737 TCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTC 22678 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || || || | |||| | |||||||||||||||||||||||| |||||| Sbjct 22677 TTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAA 22618 Query 1628578 GCGCCCTTGCGCTTG 1628592 ||||| ||||||| Sbjct 22617 GCGCCAGGGCGCTTG 22603 >seq940 Length=59259 Score = 131 bits (144), Expect = 2e-24 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 50213 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 50154 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 50153 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC 50094 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||| | Sbjct 50093 AGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGC 50034 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || | || || | || | | ||||| | ||| || |||||||||| || ||| Sbjct 50033 AGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATG 49974 Query 868931 AT 868932 || Sbjct 49973 AT 49972 Score = 122 bits (134), Expect = 1e-21 Identities = 181/252 (72%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 49561 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATCTGG 49502 Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 ||||| | || |||| || || | ||||||||| || || |||||| ||||||||| Sbjct 49501 ACCTC-TCCACTGAAACGCTCGACAAGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAA 49443 Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808 || ||||||||||| || |||| ||||| |||||| | | ||| ||||| Sbjct 49442 GAAGGCCAGGACGTGGGAAATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 49383 Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || | ||| || | |||||| |||||||||| |||||||||||||| || Sbjct 49382 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTT 49323 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 49322 GTACATTTGCCA 49311 >seq1194 Length=103280 Score = 118 bits (130), Expect = 1e-20 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || |||||| ||||||||||| | || || |||||| Sbjct 80994 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCAGTTGGACTGGGCGAG 80935 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || ||| ||||| |||||| ||||| ||||| |||||| Sbjct 80934 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCCACC 80875 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 80874 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 80838 Score = 87.8 bits (96), Expect = 2e-11 Identities = 199/297 (67%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 |||||||||||| |||| || || ||| || | || ||||||||||||| ||| Sbjct 81658 GTCGGCTGCATCGTCGATGGATGCCCTCCGGGCCTAGAGCTCACCGAGGCCGACATTCAG 81599 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 || || || |||||||| || ||||| |||| || | || ||||| ||||| Sbjct 81598 CCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCTCACTACCCCGCGGGACGAGAAG 81539 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300 || || ||| |||||||| ||||| ||| |||| |||| || ||| | || | | Sbjct 81538 GACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGTCACTCTGGGCACACCAATTGCT 81479 Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAA------G 18354 | | || ||| |||||||| ||| ||||| || || | ||| Sbjct 81478 ATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTACGGCGGCA-GCACAATGGACCT 81420 Query 18355 GTGCCGCGGCCCT-CACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGC 18410 || || | ||||| || ||||||| ||||||| | | |||||||| ||||||| Sbjct 81419 GTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTCGAGAAGTACGGTGTCAAGGC 81363 >seq1195 Length=32880 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||| ||||| || |||||| |||| || || | || || ||| | || || ||| Sbjct 10202 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 10261 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||| ||||||||||| || |||||||||||||||||||| |||||| || Sbjct 10262 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 10312 >seq1043 Length=31787 Score = 96.9 bits (106), Expect = 4e-14 Identities = 245/367 (67%), Gaps = 13/367 (4%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||| | || | || | | || ||||||||| Sbjct 29067 TGGGGGTGCGAGGCGGCGCCGATGGCGTCCACGGCAACGGTCAGGTTACCATCGGTGCCG 29008 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| | || || | ||||||||| | ||| |||| Sbjct 29007 TTCTTGTAGCCGATGGGGAAGGACAGGCCGGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 28948 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCC---AAATAAGGGGCCACC 1726861 || ||||| ||||| | |||||| || | ||| |||||| || | ||||| Sbjct 28947 GTGGTGCGGGCGCCGATCGCGCCCAGCGAGATCAGATCTGCCAGGAACTGAGGGG----- 28893 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919 ||| || | ||| | ||| ||| | ||| | || | | | | || ||| Sbjct 28892 AGATGGTGTCGAGCATCTCCGAGGCGATGGGGAG-TC--CCGTGCTGGTCAGGTCGGTGT 28836 Query 1726920 ACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGT 1726979 |||| || ||| | ||| || | | | | | | | | |||||| |||||||| Sbjct 28835 ACAGCTTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGT 28776 Query 1726980 CGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGA 1727039 || | ||| |||||||| ||||| || ||||| ||||| || | ||||||||||||| Sbjct 28775 CGTTAATCAGACCCTTCCAGCCGACTGTTGTGCGGGGCTTCTCCAGGTAGGCGCGCATGA 28716 Query 1727040 CCACGCA 1727046 |||||| Sbjct 28715 TCACGCA 28709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107038178375227