Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1016 104 2e-17
seq107 91.5 1e-13
>seq1016
Length=40071
Score = 104 bits (114), Expect = 2e-17
Identities = 401/623 (64%), Gaps = 13/623 (2%)
Strand=Plus/Minus
Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360
|||||||||| ||||||| ||||||| ||||||||| | |||| || || |
Sbjct 22856 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 22797
Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420
|| || ||||| | ||| | ||| | ||||| |||| |||||| ||||||| ||||
Sbjct 22796 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 22737
Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTAC 139480
| ||| ||||||||||| | | | || || || || ||| ||| |||
Sbjct 22736 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 22677
Query 139481 GTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTG 139540
|| | |||||| || || || || |||||||| || ||||| |||||||| | |
Sbjct 22676 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 22617
Query 139541 CGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCA 139597
|||| || ||| ||||| || || || | || | | || || || || ||||
Sbjct 22616 CGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCA 22557
Query 139598 ACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAG 139654
||| || | | |||| | | | |||||||| | || ||| | || | | ||
Sbjct 22556 GCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGT---AG 22500
Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-A 139713
| || | | || || || | ||||| ||||| | ||||| || | | ||
Sbjct 22499 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 22440
Query 139714 TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGT-GACCAGAAAGCA 139772
|| | | || || || ||||| |||||||| | || ||| ||||| |||||
Sbjct 22439 TCTTG-AGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCA-CGTCAACCAGGAAGCA 22382
Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832
|| | ||| || || | || |||| |||| ||| || ||||| |||||
Sbjct 22381 AGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA 22322
Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892
| | |||||||| | ||| || || ||||| || |||| ||| ||||| ||
Sbjct 22321 GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAAT 22262
Query 139893 ACCGACAGAGACTCGCATCAGCA 139915
||||| | || ||||| ||||
Sbjct 22261 TCCGACGGCAACACGCATGAGCA 22239
>seq107
Length=23034
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || ||||| || || || || || || ||| ||| || | || | || ||
Sbjct 1164 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 1223
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || ||||| || || || ||| | ||||| || || ||
Sbjct 1224 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 1283
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| | | | | || ||||||||||| |||||||| || || || |||
Sbjct 1284 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCCAC 1343
Query 24908 TTGGT 24912
||||
Sbjct 1344 CTGGT 1348
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | || || || || || || ||||| || || | |
Sbjct 1880 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 1939
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 1940 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 1999
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||||||||| | | | || || |||||
Sbjct 2000 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 2059
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| |||||||||| |||| || |||
Sbjct 2060 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGGC 2107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449890677200680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |