Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq107 86.0 5e-12
seq1129 84.2 2e-11
>seq107
Length=23034
Score = 86.0 bits (94), Expect = 5e-12
Identities = 162/237 (68%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 27013 AATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071
||||| || || || |||| ||||| |||| || | || || || || || |||||
Sbjct 2115 AATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTA 2056
Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131
||||| | | || |||| || ||||| ||||| ||| | || |||||||| ||
Sbjct 2055 TAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGG 1996
Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191
|| || || | ||||| || || ||||||| || | | | || | || |||| |
Sbjct 1995 TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAG 1936
Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || || || | || || |||| ||| || |||||||||||||||
Sbjct 1935 CTCTCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCATA 1879
>seq1129
Length=20362
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| || || ||||||||||||| | |||| | || |||||||| || |||||| | ||
Sbjct 2164 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2223
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|| ||||| || || || || | ||||| ||||| ||||||| | || | | | ||
Sbjct 2224 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 2283
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238
| ||||| | | || || || || || || | || |||||||| || || || ||
Sbjct 2284 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424928024788872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |