Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1016 210 3e-49 seq940 120 4e-22 >seq1016 Length=40071 Score = 210 bits (232), Expect = 3e-49 Identities = 574/867 (66%), Gaps = 19/867 (2%) Strand=Plus/Minus Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||||| | || ||||||| || ||||| || || |||| |||||| || || Sbjct 23094 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 23035 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| | ||| || ||||||| ||| || || ||| || |||| |||||| || || Sbjct 23034 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 22975 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| |||| || ||||||||||| |||||| | || | || ||||| || || | | Sbjct 22974 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 22915 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933 | |||||| || | ||||| | || | || | | ||| | | | || ||||| | Sbjct 22914 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 22856 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 ||||||||| | |||||| || || ||||| ||||| | | || | || || || || Sbjct 22855 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 22796 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || | || |||||||| | ||| | ||| ||||||| |||||||||||||| || Sbjct 22795 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 22736 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 || |||| | || ||||||| || || ||| | || || | || || || Sbjct 22735 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 22676 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 22675 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 22616 Query 119174 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227 || | | || |||| |||||| ||||| | || ||| |||||| ||||| Sbjct 22615 GCC---AGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACG 22559 Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTG 119285 ||||| |||| ||||| | ||| ||| || || || | || ||||| || | Sbjct 22558 CAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGA-AC-CGGTA 22501 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 || | | ||||| || || ||| ||||| || || ||| ||||| || || Sbjct 22500 GCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAG 22441 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCA 119404 | ||||| || | ||||| || || || ||| | || | | | | |||||||| Sbjct 22440 GTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGT-CAACCAGGAAGCA 22382 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 | | || ||| ||| ||| | || ||||| | ||| || | ||||| |||| Sbjct 22381 AGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA 22322 Query 119465 CATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAA 119523 ||| | ||||||||| || ||| ||||| | | | |||||| || ||||||| Sbjct 22321 -GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAA 22263 Query 119524 TACCGATCGAGACCCGCATAAACATGT 119550 | |||| | || ||||| | || || Sbjct 22262 TTCCGACGGCAACACGCATGAGCAAGT 22236 >seq940 Length=59259 Score = 120 bits (132), Expect = 4e-22 Identities = 301/455 (66%), Gaps = 18/455 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 50204 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 50145 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 50144 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC------AGC 50091 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| |||| |||||||| |||| || ||||||||| || | || Sbjct 50090 AGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGA 50031 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| | |||| ||| ||||||| | || || || | |||| Sbjct 50030 CCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATG 49971 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC---GGCA 130018 | |||| || | | || | | | || | | | ||| || ||| Sbjct 49970 TCCTGAACCACCTTAGGATCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAGGCG 49914 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 49913 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 49854 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||| | |||||| || | |||||||||||||||||||| ||| Sbjct 49853 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 49794 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 || ||| ||||| |||| |||||| ||| || Sbjct 49793 TCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAA 49759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618425683828360