Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1016 242 4e-59 seq1049 140 4e-28 >seq1016 Length=40071 Score = 242 bits (268), Expect = 4e-59 Identities = 516/764 (68%), Gaps = 10/764 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || ||| | || || ||||| || ||| | | | Sbjct 22229 CCTCAGCACTTGCTCATGCGTGTTGCCGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 22288 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||| ||| |||| ||| ||| |||||||| || |||||| | || || ||||| Sbjct 22289 ATTGAGACATACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCCACTTTGTTC 22348 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || | ||| || || ||| | | ||||||||||| | ||| | ||| Sbjct 22349 AATGCCGCTACTCCCCAGCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGAC 22408 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || || ||||| || || |||||| |||||| ||||||||| | || Sbjct 22409 AGCATTGAGGGTATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGC 22468 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||||| | || || | || | || || | ||| | || || || | Sbjct 22469 GGTATCGGTCTGAACG--TCCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCA 22526 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 ||||| | || | || || || |||||||| || || || |||||||| ||||| || | Sbjct 22527 ACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATG 22586 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | ||||||||||| |||||| || | || ||||||||||| ||||||||||||| Sbjct 22587 TTGACCAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACG 22646 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 |||| | | ||||| || || ||||| ||| || ||| | || ||| | || || Sbjct 22647 CCGATGTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCC 22706 Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 ||||||| || ||| ||| |||||| ||| || ||||||||| | || ||| || Sbjct 22707 GTGACCTCTTCTAC-GCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAAC 22765 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 | || ||| || | || || |||||| ||||||||| | |||||||||||| Sbjct 22766 GGTGACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGAT 22825 Query 53777 GAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCA 53834 ||||| ||| | || || |||| |||| ||||||| | |||| ||| Sbjct 22826 GAGTTCGACGCTCTCTACGCGAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACTATCA 22883 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 |||| | || | ||| | || || ||| || ||| ||||| || | || | || Sbjct 22884 AGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCA 22943 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || |||||||||| | |||| ||||||| |||||||||||| Sbjct 22944 TGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 22987 >seq1049 Length=72713 Score = 140 bits (154), Expect = 4e-28 Identities = 295/440 (67%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||||||||| || || || || |||||||||||||| |||||||| | ||| | Sbjct 60743 CCAGTTCCGATACCATCCGCGCCGTTGATCAGAATCATCGGGACGACAGGCATAAAGACC 60684 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | || ||||| | ||| | || | | | || || | Sbjct 60683 TCGGGCTCAATTTTCTTGCCATCGTCTTCGTTGTATGTTAGTAGTGGCTCATCGGCCGTA 60624 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| || || | | || | ||||||||| | |||||||||| || ||| | Sbjct 60623 TGGAAGATTTTGCGTGCAAAGGGGGACAGGCGAGTGTAGATGTAACGAGCACTGGCACAA 60564 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || || ||||| ||| || |||| || | |||||| ||||| | | ||| | ||| Sbjct 60563 TCATTACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCTAGGCAGTTGATATTG 60504 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 |||| ||| |||||| | || || | || || || || ||| | || || Sbjct 60503 TTGGAGCCAACAAAGGTCTGGGCAAGACCAACGATAGTCTGCTGAAGGGAGACGTCGCCG 60444 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 ||||| || || ||| | | || | || ||||||| | ||||||||||||| | Sbjct 60443 TGGTGGTAGGCTGTCATTCCGGATACATGACCTGCCAGCTCAACCACCTTCATGTCCTTC 60384 Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 |||| || || |||| | || |||||||||||||| ||||||| |||||| Sbjct 60383 TTCAGATTACGGCGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTTCAAACCATCG 60324 Query 117572 GCCACGTGAGGGATCGAACG 117591 | ||| |||||||||||| Sbjct 60323 ACAACGGAAGGGATCGAACG 60304 Score = 102 bits (112), Expect = 9e-17 Identities = 200/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || ||| ||||||| || | ||||| ||| || |||||| || || | ||||| Sbjct 60593 CGAGTGTAGATGTAACGAGCACTGGCACAATCATTACCACCTTGAAGTCGACTACCAAAG 60534 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||||| ||| ||||| ||||||| ||| || || |||| || | | Sbjct 60533 TTTCCACTAGGCTCTAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGGGCAAGACCA 60474 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 || || || ||| || | || |||||||| || || ||| |||| ||| || Sbjct 60473 ACGATAGTCTGCTGAAGGGAGACGTCGCCGTGGTGGTAGGCTGTCAT-TCCG-GATACAT 60416 Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263 || |||| || |||||||||||||| || |||| || || ||||| || || Sbjct 60415 GACCTGCCAGCTCAACCACCTTCATGTCCTTCTTCAGATTACGGCGGAAACAGGTGTGAA 60356 Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 |||||||||||| || |||||||| || || ||| ||| |||||||| Sbjct 60355 GCACCTTGCGCTGACCGGGCTTCAAACCATCGACAACGGAAGGGATCGAACG 60304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547207579713800