Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1016 253 2e-62 seq107 183 3e-41 seq940 147 2e-30 seq1129 118 1e-21 seq930 93.3 5e-14 >seq1016 Length=40071 Score = 253 bits (280), Expect = 2e-62 Identities = 803/1231 (65%), Gaps = 33/1231 (3%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| ||||| |||||||| ||| | ||||| || ||| | ||||| || | Sbjct 23447 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCGGCGTAGGTCTCATATG 23388 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 || | ||||||| | ||| || || | | | ||| |||| |||||| ||| | Sbjct 23387 TACCAAGCTTCTTGGCAATCTCGCAGGAAGCAGTCAAGGCACCGTGGTAAATGGTCTCGA 23328 Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 ||| |||| | | |||| ||| |||||| | || | || || || Sbjct 23327 AGATCTGGATGTTGAGCTGTCTAGCCTCGGGGGAGTCGAATGGCAGACGCAGAGCCAGGA 23268 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778 | | ||||| || || | || |||| || || |||||||| || ||| | || | Sbjct 23267 AAGCATCAGCAAGACCGTTGACACCGAGAGCAATGGGGCGGTGACGGAAGTT-GCTCTTC 23209 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 | || || |||| ||||| |||| |||| |||| |||||||||| | | | Sbjct 23208 TTCGCTTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGGTTGTGAACGAGA 23149 Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TCA-CAA 80890 ||| | || || || || || |||||| | | | || | ||| || Sbjct 23148 ACCTGCACGACCTCGTGGAGCTTGCCAAAGTCATACTCG--CCTCGGGCAGAGTCAACAT 23091 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAA 80947 | | || ||| ||||| ||||| ||||| || |||||||| |||| || ||||| Sbjct 23090 AAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCA-CTGTA- 23033 Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| || || ||||||| || || ||| ||||||||||| |||||||| Sbjct 23032 -CTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTAC 22974 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| ||||||||| ||||||||| |||| | ||| |||| ||||| ||| | || Sbjct 22973 TCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCT 22914 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 ||| ||||||| ||| | || | ||||||| ||||||| ||| || | Sbjct 22913 CGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCT 22854 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 | ||||| ||||| ||||||||| |||||| | |||| ||| | ||| || Sbjct 22853 CGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCT 22794 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 |||| || || | || |||||| || | ||| || ||||||||| || | Sbjct 22793 CGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGG 22734 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGC 81307 | |||| | ||| ||| ||||| ||| || ||||||| | ||| ||||| | Sbjct 22733 GAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCC 22674 Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367 ||| || || || || | || || || ||||| |||||||| || | ||| | | | Sbjct 22673 GCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGCGC 22614 Query 81368 CCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACA 81424 | ||| | |||||||||| || || ||||| || |||||| ||||||| || Sbjct 22613 CAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCAGCA 22554 Query 81425 TAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA 81484 |||| | ||||| | || ||||| || || | || ||| || | ||||| | Sbjct 22553 TAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAGCGCGAA 22494 Query 81485 CCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGG 81540 ||| | | || |||||||| || || | ||| || ||| ||||| Sbjct 22493 ---TGC-GGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTC 22438 Query 81541 TTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTT 81600 || | || ||||| || ||||| ||||| ||| ||| ||||| || ||| || | Sbjct 22437 TTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGAT 22378 Query 81601 GACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAAT 81658 | | ||| |||| | ||| |||||||||||| || |||| |||||| |||| | Sbjct 22377 GCAAGCTG-GGGC-TGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAAGT 22320 Query 81659 AACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATAC 81718 | | ||||||| || || || || || | ||| || || |||||||| | Sbjct 22319 ACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTC 22260 Query 81719 CGATAGCTACACGCATAAACATGTACTGGGG 81749 ||| || |||||||| | || || ||| || Sbjct 22259 CGACGGCAACACGCATGAGCAAGTGCTGAGG 22229 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| |||||||| ||| ||||||||||| | |||||| Sbjct 23955 GTACGCAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCGGCGAAGTGCATGCTG 23896 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||||||| | | || || | || || | |||||| || ||||| |||||| |||| Sbjct 23895 GTGAGCTTGCCCATGGTAGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG 23836 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 | || || || || || ||||| Sbjct 23835 TAGGCACCGCGGTCAGCGGCCAT 23813 >seq107 Length=23034 Score = 183 bits (202), Expect = 3e-41 Identities = 181/232 (78%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || ||||| || || || ||||| ||| || | Sbjct 1880 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAG--AGCT 1937 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| || | ||| | || || |||||||||||||| ||||| || |||| Sbjct 1938 CAGATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 1997 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| || ||||| | ||||| || | ||||||| Sbjct 1998 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATA 2057 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 || |||| ||||| |||||||| || || || |||||||| || || || || Sbjct 2058 ATATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGGCCA 2109 Score = 178 bits (196), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || ||||| || || || ||||| ||| || | Sbjct 1652 ATGCAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAG--AGCT 1709 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| || | ||| | || || |||||||||||||| ||||| || |||| Sbjct 1710 CAGATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 1769 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| || ||||| | ||||| || | ||||||| Sbjct 1770 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATA 1829 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || ||||| ||||| ||||| || ||| | ||||| || ||||| Sbjct 1830 ATATTCAGAAGGAGTCCACACTTCACCTTGTCCTCCGTCTACGTGGTGG 1878 Score = 159 bits (176), Expect = 4e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || ||||| || || || |||||||||||||| | |||| || | || | ||| | Sbjct 1164 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 1223 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| |||||||| |||||||||||||| || || ||||| ||| Sbjct 1224 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 1283 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| ||| ||||| | || ||||| |||||||||| |||||||| || Sbjct 1284 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCCAC 1343 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || || || Sbjct 1344 CTGGTCCTTCGCCTCCGTGGCGG 1366 Score = 147 bits (162), Expect = 2e-30 Identities = 164/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT--GATAGCATTG 27475 || ||||| || || || |||||||| || || ||||| ||| || | |||| ||||| Sbjct 1436 GTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAG--AGCTCAGATACCATTG 1493 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 || | ||| | || || |||||||||||||| ||||| || |||||||| ||||| | Sbjct 1494 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTA 1553 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | || ||||| ||||| || || |||| ||||||||| | || || ||| | || || | Sbjct 1554 TCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAAG 1613 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||||| || ||| | ||||| || ||||| Sbjct 1614 AGTCCACACTTCACCTTGTCCTCCGTCTACGTGGTGG 1650 >seq940 Length=59259 Score = 147 bits (162), Expect = 2e-30 Identities = 336/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| | |||||| |||| ||||| || || | ||| | || | | |||| Sbjct 49711 AAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACTTTCGCTTCGCGT 49770 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | || || ||| ||| || || || ||||| ||||| |||||| || || ||| Sbjct 49771 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 49830 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| ||||||||||| || ||| | || || ||||||||||||||||| Sbjct 49831 TGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGT 49890 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACC- 64898 |||||||| |||||| || || || | |||||| |||| | || || || Sbjct 49891 GACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 49950 Query 64899 -ATCACATGGGACTATAATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTC 64956 ||| | || | | || || || | ||| || | ||||| |||| ||| Sbjct 49951 GATCCTAAGGTGGTTCAGGACATCATTGTTGA---GGCCGTCGGCATTGAGCAGGAGTTC 50007 Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016 |||||| ||| ||||| || |||| | |||||| | || | ||| |||| Sbjct 50008 CTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGAGTAC 50067 Query 65017 ATCGAATTTGTAGCAGATCGCCTGC---TTACTCAGTTTGGTATTAAGCCCTACTGGAAT 65073 ||||| || || || || ||||||| | ||| | || | ||| |||| || Sbjct 50068 ATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTC---TCGGCAACAAGAAGTACTACAAC 50124 Query 65074 TCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTT 65133 || | || || || |||| |||||| | ||| ||||| || ||||| ||||| || Sbjct 50125 GCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTC 50184 Query 65134 GAAAAGAGGGTAGGTGATTAC 65154 || ||| | || ||||| ||| Sbjct 50185 GAGAAGCGTGTCGGTGACTAC 50205 >seq1129 Length=20362 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 2342 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 2283 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || ||||| |||||||| ||||| || ||||||||||| || Sbjct 2282 GACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTG 2223 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 2222 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 2164 Query 27594 GG 27595 || Sbjct 2163 GG 2162 >seq930 Length=45409 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || ||||||||||| || || || || || ||||| |||||| Sbjct 25069 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 25128 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | || || || |||| ||||| || || ||||| || ||| | Sbjct 25129 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 25188 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 25189 CGCCTGCGTGGTGG 25202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570301624348720