Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1078 86.0 5e-12
>seq1078
Length=80403
Score = 86.0 bits (94), Expect = 5e-12
Identities = 245/377 (65%), Gaps = 0/377 (0%)
Strand=Plus/Plus
Query 30083 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 30142
|||||||| || |||||||| || || ||||||||| |||| || ||||||
Sbjct 9297 TGGCACGGGGGCAGAGCCATCTTTTTCAGATCAGCGGGGTTCCACGCGCTCATGATGATA 9356
Query 30143 CGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCC 30202
|| | || ||||||| ||| || ||| | | || ||||| || || |||
Sbjct 9357 CGGCGATCGAAGGGGTTGTGAATGAGCTTGTGCACAACATCTTTGAGCTGGTCGACACCC 9416
Query 30203 ATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAAC 30262
|| | ||| || | | | ||| |||||| || || || |||| |||||||||
Sbjct 9417 TGGCCGGTGTAATCAGTCTTAGCGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGGAAT 9476
Query 30263 CCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAG 30322
|| ||||| ||||| || || || ||||| | ||| ||| ||| || || | ||
Sbjct 9477 CCATACACGGGTCCTAGATCGCCTTCTTCACGGTGGCCGAGGCCTGATTTATCAAGGAAT 9536
Query 30323 TCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTT 30382
|| | | || || ||||||| || || | ||| || |||||| ||||
Sbjct 9537 TCGCGGCTTCCATTTCCGTCCCAAATTTTAATCCCAGCTTCGGAGAGCGGGAGGGAGGAG 9596
Query 30383 GTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTG 30442
||| | || || |||||| || || || | || ||||| ||||| | |||
Sbjct 9597 GTGCAGCCAGAGATGAACCAGAGTAGTTCGGCAACCACGGCGCGTAGGAAGACTCGCTTC 9656
Query 30443 GTCGTGAGGAGGGGAAA 30459
|| ||||||||||| ||
Sbjct 9657 GTGGTGAGGAGGGGCAA 9673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406304304201252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |