Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq107 118 7e-22 >seq107 Length=23034 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||||||||||| ||||||||| |||||| || || ||||| || || Sbjct 2107 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGA 2048 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || || ||||| || || || | |||||| ||||| || || Sbjct 2047 GAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGG 1988 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| | ||| || ||| |||||| | Sbjct 1987 AATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA 1929 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || || || || || || || || ||||| || ||||| Sbjct 1928 CCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || || | |||| ||||||||| ||||||||| ||||||||||| ||| Sbjct 1366 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 1307 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || || || || || | |||||| ||||| || || Sbjct 1306 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 1247 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 1246 ATACCCTCCTTGTCCTGGATCTT 1224 Score = 91.5 bits (100), Expect = 9e-14 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| ||||| ||||| || || || || || |||| || || || Sbjct 1854 TGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGC 1795 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | |||||| ||||| || || | ||||||||||| |||| || Sbjct 1794 TTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATC-TT 1736 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||| || ||| |||||| || || | || || || || || || Sbjct 1735 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGT 1676 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || ||||| Sbjct 1675 CAAAGTCTTGACAAAGATTTGCAT 1652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314724878170823