Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq107 118 7e-22
>seq107
Length=23034
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||||||||| ||||||||| |||||| || || ||||| || ||
Sbjct 2107 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGA 2048
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || |||| || || || ||||| || || || | |||||| ||||| || ||
Sbjct 2047 GAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGG 1988
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | ||| || ||| |||||| |
Sbjct 1987 AATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA 1929
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || || || || || || ||||| || |||||
Sbjct 1928 CCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880
Score = 96.9 bits (106), Expect = 2e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | |||| ||||||||| ||||||||| ||||||||||| |||
Sbjct 1366 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 1307
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || || || || || || | |||||| ||||| || ||
Sbjct 1306 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 1247
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 1246 ATACCCTCCTTGTCCTGGATCTT 1224
Score = 91.5 bits (100), Expect = 9e-14
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| |||||| ||||| ||||| || || || || || |||| || || ||
Sbjct 1854 TGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGC 1795
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||| || || || | |||||| ||||| || || | ||||||||||| |||| ||
Sbjct 1794 TTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATC-TT 1736
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| | ||| || ||| |||||| || || | || || || || || ||
Sbjct 1735 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGT 1676
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| || |||||
Sbjct 1675 CAAAGTCTTGACAAAGATTTGCAT 1652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314724878170823
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |