Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq107 199 9e-46 seq1129 122 2e-22 seq1016 120 7e-22 seq930 111 4e-19 >seq107 Length=23034 Score = 199 bits (220), Expect = 9e-46 Identities = 164/200 (82%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| ||||||||||| || || || ||||| | |||||| | |||||| Sbjct 1635 AGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCT 1576 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| ||||| ||||| || |||| || ||||||||| Sbjct 1575 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1516 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || ||||| || ||||| || |||||||| ||||| ||| Sbjct 1515 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTC 1456 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 1455 TTTCCAGTTAGGGTCTTAAC 1436 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| |||||||| || || || ||||| |||| || || | ||| || Sbjct 1863 AGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCC 1804 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||||||||| || || ||||| || |||| || ||||||||| Sbjct 1803 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1744 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || ||||| || ||||| || |||||||| ||||| ||| Sbjct 1743 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTC 1684 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | |||||| ||||| | ||||| Sbjct 1683 TTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 1652 Score = 183 bits (202), Expect = 7e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| ||||||||||| || ||||| ||||| |||| || || | ||| || ||| Sbjct 2088 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 2029 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || ||||||||||| || || ||||| || |||| || |||||||||||| Sbjct 2028 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 1969 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| || ||||| || ||||| || |||||||| ||||| |||||| Sbjct 1968 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 1909 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| ||||| | ||||| Sbjct 1908 CCAGTCAAAGTCTTGACAAAGATTTGCAT 1880 Score = 181 bits (200), Expect = 2e-40 Identities = 154/190 (81%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| ||||||||||||||||||| |||||| | ||||| Sbjct 1351 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 1292 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| || || ||||||||||||| || ||||||||| Sbjct 1291 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 1232 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || || | |||||||| || ||||| || Sbjct 1231 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 1172 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 1171 TTGCCAGTGA 1162 >seq1129 Length=20362 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 2164 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2223 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 2224 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 2283 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 2284 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2340 Query 211104 AA 211105 || Sbjct 2341 AA 2342 >seq1016 Length=40071 Score = 120 bits (132), Expect = 7e-22 Identities = 193/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 22987 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 22931 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| |||||| |||||||| | ||| |||| ||| || || |||||| Sbjct 22930 AGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG 22871 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || | ||||||||| |||||| | ||||| || || |||||||| Sbjct 22870 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATC 22811 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| ||||| ||||| |||||||| |||| | ||||| ||| || || Sbjct 22810 AGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCG 22751 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | ||||| | || ||||| Sbjct 22750 CTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 22715 >seq930 Length=45409 Score = 111 bits (122), Expect = 4e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| ||||||| || || | ||||| Sbjct 25187 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 25128 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || |||||||| || | || |||||||| Sbjct 25127 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 25069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159133717637315