Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq107 109 5e-19
>seq107
Length=23034
Score = 109 bits (120), Expect = 5e-19
Identities = 158/219 (72%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| ||||||| || || ||| ||| || || |||||||| || | || || ||| ||
Sbjct 2094 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 2035
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || ||||| || || || || ||||||||||||||||||| ||| | || ||| |||
Sbjct 2034 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 1975
Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245
||| ||| || |||| ||| | | | ||||| ||| ||| || || | ||
Sbjct 1974 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCT---CTCGACCTCGAGTGT 1919
Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| | ||||| |||| || || ||||||||||||||
Sbjct 1918 GATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880
Score = 102 bits (112), Expect = 7e-17
Identities = 149/207 (72%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| || || |||||||| || | || || ||| |||| || |||||
Sbjct 1854 TGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGC 1795
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
|| || || || ||||||||||||||||||| ||| | || ||| |||||| ||| ||
Sbjct 1794 TTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTG 1735
Query 39202 TGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCC 39257
|||| ||| | | | ||||| ||| ||| || || | ||||| | |||||
Sbjct 1734 GACTTGA-CGTTGTCAATGGTATCTGAGCT---CTCGACCTCGAGTGTGATGGTCTTTCC 1679
Query 39258 CGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| || || ||||||||||||||
Sbjct 1678 TGTCAAAGTCTTGACAAAGATTTGCAT 1652
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| ||||| || |||||||| | ||| || || | || |||
Sbjct 1348 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 1289
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || ||||||||||||||||| | || | | ||| |||||| |
Sbjct 1288 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 1229
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | |||||||| ||||| || || | ||||| ||||
Sbjct 1228 ATCTTGGACTTGA-CGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTT 1170
Query 39255 TCCCGT 39260
|| ||
Sbjct 1169 GCCAGT 1164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429539155607903
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |