Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq107 109 5e-19 >seq107 Length=23034 Score = 109 bits (120), Expect = 5e-19 Identities = 158/219 (72%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || ||||||| || || ||| ||| || || |||||||| || | || || ||| || Sbjct 2094 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 2035 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||| || || || || ||||||||||||||||||| ||| | || ||| ||| Sbjct 2034 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 1975 Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| ||| || |||| ||| | | | ||||| ||| ||| || || | || Sbjct 1974 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCT---CTCGACCTCGAGTGT 1919 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| | ||||| |||| || || |||||||||||||| Sbjct 1918 GATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880 Score = 102 bits (112), Expect = 7e-17 Identities = 149/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || |||||||| || | || || ||| |||| || ||||| Sbjct 1854 TGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGC 1795 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || ||||||||||||||||||| ||| | || ||| |||||| ||| || Sbjct 1794 TTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTG 1735 Query 39202 TGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCC 39257 |||| ||| | | | ||||| ||| ||| || || | ||||| | ||||| Sbjct 1734 GACTTGA-CGTTGTCAATGGTATCTGAGCT---CTCGACCTCGAGTGTGATGGTCTTTCC 1679 Query 39258 CGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || |||||||||||||| Sbjct 1678 TGTCAAAGTCTTGACAAAGATTTGCAT 1652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || ||| ||| ||||| || |||||||| | ||| || || | || ||| Sbjct 1348 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 1289 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || ||||||||||||||||| | || | | ||| |||||| | Sbjct 1288 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 1229 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | |||||||| ||||| || || | ||||| |||| Sbjct 1228 ATCTTGGACTTGA-CGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTT 1170 Query 39255 TCCCGT 39260 || || Sbjct 1169 GCCAGT 1164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429539155607903