Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq107 165 2e-35
seq1129 114 3e-20
seq930 87.8 4e-12
>seq107
Length=23034
Score = 165 bits (182), Expect = 2e-35
Identities = 156/199 (78%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || ||||| || |||||||||||||| || |||||||| ||||| |
Sbjct 1434 TCGTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTG 1493
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||| |||||||| || || || || || ||||||||||| ||||
Sbjct 1494 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTA 1553
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
||||||| || || ||||| |||||||| | || ||| | ||||| || | || ||||
Sbjct 1554 TCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAAG 1613
Query 178111 AATCAACACTGCATCTTGT 178129
| || ||||| || |||||
Sbjct 1614 AGTCCACACTTCACCTTGT 1632
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | |||||||| || ||||| |||||||| || ||||||||
Sbjct 1655 CAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 1714
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || || || || ||||||||
Sbjct 1715 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 1774
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||||| || || ||| | ||||| | || ||||| |
Sbjct 1775 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATT 1834
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || ||||| || |||||
Sbjct 1835 CAGAAGGAGTCCACACTTCACCTTGT 1860
Score = 149 bits (164), Expect = 2e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | || ||||| || ||||| |||||||| || ||||||||
Sbjct 1883 CAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 1942
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || || || || ||||||||
Sbjct 1943 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 2002
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||||| || || ||| | ||||| | || ||||| ||
Sbjct 2003 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATC 2062
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || || || || || |||
Sbjct 2063 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 2092
Score = 134 bits (148), Expect = 3e-26
Identities = 142/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || ||||| |||||||| ||||| || | || || ||||| ||||||||
Sbjct 1162 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGT 1221
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| || || || ||||| |||||||| || ||||||||||| || |
Sbjct 1222 CCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 1281
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || ||||| | || ||| | ||||||||| ||||||| || || || || |
Sbjct 1282 AGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCC 1341
Query 178123 ATCTTGT 178129
| || ||
Sbjct 1342 ACCTGGT 1348
>seq1129
Length=20362
Score = 114 bits (126), Expect = 3e-20
Identities = 136/183 (74%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 2343 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 2287
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| ||||| || || || || || || |||||||| ||
Sbjct 2286 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 2227
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| |||||||||||||| |||||||| ||||| | || || ||| || ||| ||||
Sbjct 2226 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 2167
Query 178106 AAA 178108
||
Sbjct 2166 GAA 2164
>seq930
Length=45409
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || ||||| || |||||||| || || ||||||||||| || ||||||||
Sbjct 25069 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 25128
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||| | ||||| | ||||| ||| |||| || || || || || || || ||
Sbjct 25129 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 25184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203712214525814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |