Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq24 107 4e-18
seq246 87.8 4e-12
>seq24
Length=276994
Score = 107 bits (118), Expect = 4e-18
Identities = 133/180 (74%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
||||| || |||||| || | ||||| |||||||| |||| |||||| ||||| |||
Sbjct 7441 TGTCCACCATTCAAGATCATCATCCTCGACGAGGCCGACAGCATGACACAAGACGCCCAG 7382
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTG--TGACGCGTTTTTGCCTGGTGT 254319
||||| || ||||| |||||||||| || | || | | ||||| || || || || |
Sbjct 7381 TCCGCTCTGCGCCGCACGATGGAGA--CATACAGTAGGATCACGCGGTTCTGTCTTGTTT 7324
Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||||||| || || ||||| | || || ||| ||| ||| |||||| |||||||
Sbjct 7323 GCAACTATGTCACGCGCATCATTGAGCCTCTTGCTAGTCGTTGCAGCAAGTTCCGATTCA 7264
>seq246
Length=965961
Score = 87.8 bits (96), Expect = 4e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 486013 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTTGATCTGCGGAAG 485954
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
||| |||| || ||| | | || |||||||||||||||| ||||| ||||
Sbjct 485953 AACCACGGTAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTACGCTTTGTGGACTCCCGAT 485894
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCC 249456
| |||||| ||||| ||||| |||| || ||||| || | | ||| ||| |||
Sbjct 485893 CTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGACACTCTTCTGTCCCAACGAGGCC 485834
Query 249457 CCGGACCTCATCGATCTACACGGCGCCGACTTCGAC 249492
|| | ||| ||| | |||| | || ||||||
Sbjct 485833 CCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 485798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073762685439360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |