Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq199 116 9e-21
>seq199
Length=176625
Score = 116 bits (128), Expect = 9e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| || || |||||||||||||||||
Sbjct 95126 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCC 95185
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||||| || || || || ||||| || || || | ||| || || ||
Sbjct 95186 GAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGG 95245
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| | || || || || | |||||| || | ||
Sbjct 95246 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 95304
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| ||||| | || || ||||| || |||||
Sbjct 95305 GACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95355
Score = 116 bits (128), Expect = 9e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| || || |||||||||||||||||
Sbjct 95354 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCC 95413
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||||| || || || || ||||| || || || | ||| || || ||
Sbjct 95414 GAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGG 95473
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| | || || || || | |||||| || | ||
Sbjct 95474 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 95532
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| ||||| | || || ||||| || |||||
Sbjct 95533 GACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95583
Score = 113 bits (124), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| || ||||||||||||||||| |||
Sbjct 95582 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTATAATCA 95641
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| || || || ||||| || || || | || || || ||
Sbjct 95642 GAAAGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGG 95701
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| | || || || || | |||||| || | ||
Sbjct 95702 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 95760
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || | || || ||||| || |||||
Sbjct 95761 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 95811
Score = 107 bits (118), Expect = 4e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| ||||||||||| || ||||| | ||||| || || || || |||
Sbjct 94931 GTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 94990
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || || ||||| ||||| | ||
Sbjct 94991 GCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 95050
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | |||||| || | || ||||| ||||| || ||||| ||||| | ||
Sbjct 95051 ACGTTGTCAATGGTATC-TGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGT 95109
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 95110 CTTGACAAAGATTTGCAT 95127
Score = 104 bits (114), Expect = 5e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| || |||||||||||||| || |||
Sbjct 95810 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCA 95869
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| || || || ||||| || || || | || || || ||
Sbjct 95870 GAAAGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGG 95929
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| | || || || || | |||||| || | ||
Sbjct 95930 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 95988
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
||||| || || |||||||| ||||| || || || ||
Sbjct 95989 GACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAAC 96027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151394416881160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |