Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq199 93.3 4e-14
>seq199
Length=176625
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850
|||||||||| ||| | ||| || ||||| || | ||||| || | ||| || |
Sbjct 94913 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 94972
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||||||||| || || | ||||| | | ||||| || || ||||| || || |
Sbjct 94973 --TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCT 95030
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || || | ||||||| | | | || || | | ||||| || | ||||
Sbjct 95031 TGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGA 95090
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| |||||||| | ||| || |||||||| |||||
Sbjct 95091 TGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95127
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/189 (72%), Gaps = 8/189 (4%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||| ||| | ||| || |||||||| | ||||||||| | || || || |||||
Sbjct 96115 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCG--AAAGGGTGCGACCATCCT 96172
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| || || | ||||| | | ||||| || ||||||||||| || ||||| |
Sbjct 96173 CAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 96232
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGT 94974
|| || | ||||||| | ||| ||| || || ||| || || |||| ||||||||
Sbjct 96233 GGATCTTGGACTTGACGTTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGT 96290
Query 94975 TTTTCCAGT 94983
||| |||||
Sbjct 96291 TTTGCCAGT 96299
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || || | ||||| | | ||||| || || ||||| || || |||
Sbjct 95201 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 95260
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||||||| | | | || || | | ||||| || | ||||||
Sbjct 95261 TCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATG 95320
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | ||| || |||||||| |||||
Sbjct 95321 GTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95355
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || || | ||||| | | ||||| || || ||||| || || |||
Sbjct 95429 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 95488
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||||||| | | | || || | | ||||| || | ||||||
Sbjct 95489 TCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATG 95548
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | ||| || |||||||| |||||
Sbjct 95549 GTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289687017200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |