Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq230 192 9e-45 seq34 168 1e-37 >seq230 Length=667611 Score = 192 bits (212), Expect = 9e-45 Identities = 205/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || ||||||||||||||||||||||| || | Sbjct 77834 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAAGGAATCACCAAGCCGGCCA 77776 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 77775 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 77716 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||| ||| || ||| |||| Sbjct 77715 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 77656 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| ||||||||| | || ||||||| || | || || || | Sbjct 77655 AGCACGCCAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 77596 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| || |||| Sbjct 77595 GCCGTACCCTCTACGGTTTCGGTGGTTA 77568 >seq34 Length=242997 Score = 168 bits (186), Expect = 1e-37 Identities = 189/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 16397 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 16339 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 16338 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 16279 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 16278 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 16219 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 16218 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 16159 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 16158 CCGTAAGTTT 16149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074953137110