Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq199 105 6e-18 >seq199 Length=176625 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || |||||||| |||| || ||| || Sbjct 95811 ATGCAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 95752 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| || ||| ||||| || || ||||| || ||||| Sbjct 95751 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 95692 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| || || ||||| || | ||||||| ||| || | ||||| ||| Sbjct 95691 CAACGTCTTATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTATAAT 95632 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| ||||| ||||| || || Sbjct 95631 ATTCAGAAAGAGTCCACACTTCA 95609 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || |||||||| |||| || ||| || Sbjct 95355 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 95296 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| || ||| ||||| || || ||||| || ||||| Sbjct 95295 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 95236 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || || | || ||| | || || ||| Sbjct 95235 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 95176 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || ||||| || || Sbjct 95175 ATTCAGAAGGAGTCCACACTTCA 95153 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || |||||||| |||| || ||| || Sbjct 95583 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 95524 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| || ||| ||||| || || ||||| || ||||| Sbjct 95523 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 95464 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || || | || ||| | || || ||| Sbjct 95463 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 95404 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || ||||| || || Sbjct 95403 ATTCAGAAGGAGTCCACACTTCA 95381 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || |||||||| |||| || ||| || Sbjct 95127 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 95068 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| || ||| ||||| || || ||||| || ||||| Sbjct 95067 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 95008 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || || | || ||| | || || ||| Sbjct 95007 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 94948 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 94947 ATCCAGAAGGAGTCCACTCTCCA 94925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326574080050