Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq199 98.7 1e-15
seq101 84.2 2e-11
>seq199
Length=176625
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || ||||| ||||| || ||||| | | ||| || | |||
Sbjct 95600 AGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTACGACCATCT 95659
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || | || || || ||||||||||| ||||| || || || ||
Sbjct 95660 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 95719
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||| | || || || | || | ||||
Sbjct 95720 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTC 95779
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||||||| || || || ||||||||
Sbjct 95780 TTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 95811
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | ||| || || || | || || || ||||| ||||| ||||| |
Sbjct 96096 ACCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGA 96155
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || |||||||||||||| || | || || ||||||||||| |||||
Sbjct 96156 AAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 96215
Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359
||| || || || || || || ||
Sbjct 96216 AATACCCTCCTTGTCCTGGATCTT 96239
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || ||||| ||||| |||||||| | | ||| || | |||
Sbjct 95828 AGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCT 95887
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || | || || || ||||||||||| ||||| || || || ||
Sbjct 95888 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 95947
Query 64352 TGTATTTT 64359
|| || ||
Sbjct 95948 TGGATCTT 95955
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || ||||| || || || | || || || ||||
Sbjct 95144 AGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCC 95203
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || || | || || |||||||||||||| ||||| || || || ||
Sbjct 95204 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 95263
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||| | || || || | || | ||||
Sbjct 95264 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTC 95323
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||||||| || || || ||||||||
Sbjct 95324 TTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95355
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || ||||| || || || | || || || ||||
Sbjct 95372 AGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCC 95431
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || || | || || |||||||||||||| ||||| || || || ||
Sbjct 95432 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 95491
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||| | || || || | || | ||||
Sbjct 95492 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTC 95551
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||||||| || || || ||||||||
Sbjct 95552 TTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95583
>seq101
Length=1008413
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || |||| ||||| || || || ||||||||||| |
Sbjct 726680 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 726621
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || |||||||||||||| | || || ||||||||||| || ||
Sbjct 726620 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 726561
Query 64336 AATTCCTTCTTTTTCT 64351
|| || || || |||
Sbjct 726560 GATACCCTCCTTGTCT 726545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643113698800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |