Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq263 176 4e-39 seq220 87.8 2e-12 >seq263 Length=109146 Score = 176 bits (194), Expect = 4e-39 Identities = 308/446 (69%), Gaps = 23/446 (5%) Strand=Plus/Minus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| |||||||| | || || || ||| || ||| ||||||| | Sbjct 78990 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 78931 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 |||| | | ||| | ||||| |||||||| ||| ||||||| |||| || || | Sbjct 78930 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 78871 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 |||| || || ||||| ||||| || || || || | ||| || | | ||| Sbjct 78870 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 78811 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||||| || |||| ||||| || | || || Sbjct 78810 ATCCTAAGGTGGTTCAGGACATCAT--------TGTT----GAGGCCGTCGGCATTGAGC 78763 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| |||| | ||| || || || ||||| ||||||||| | || ||||| Sbjct 78762 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 78703 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||||||||||||||| || || || || ||| ||||| ||||| || | | |||||| Sbjct 78702 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGG-CAACAAGAAGTAC 78644 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||||| ||| || || || || ||| | ||| || || | |||||||||||| Sbjct 78643 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAAC 78584 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||| || || Sbjct 78583 TTCTTCGAGAAGCGTGTCGGTGACTA 78558 >seq220 Length=92616 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 67934 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 67875 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || || || || | || || || | ||| Sbjct 67874 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATC-CTGGATCTTGGTCTTGACGTTG 67816 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 67815 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 67757 Query 138603 AAAA 138606 ||| Sbjct 67756 GAAA 67753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260725114400