Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq199 116 4e-21 seq220 104 2e-17 >seq199 Length=176625 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| |||||||| ||||| | || ||| ||| || ||||| || ||| Sbjct 95615 GTGGACTCTTTCTGAATATTATAATCAGAAAGGGTACGACCATCTTCAAGCTGCTTGCCA 95674 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || ||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 95675 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 95734 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | |||||||| |||| || | || || || |||| ||| Sbjct 95735 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGT 95793 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| || ||||| Sbjct 95794 CTTGACAAAGATTTGCAT 95811 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| || | || ||||| || || ||||| || || | || || Sbjct 94913 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 94972 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| ||||| || |||||||||||| Sbjct 94973 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 95032 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | ||| || | |||||||| |||| || | Sbjct 95033 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGAT 95091 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || |||| ||| || ||||| || ||||| Sbjct 95092 GGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95127 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| |||||||||||||| | || ||| ||| || ||||| || ||| Sbjct 95843 GTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTGCTTGCCA 95902 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || ||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 95903 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 95962 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | |||||||| |||| ||| | || || || || || || Sbjct 95963 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGT 96021 Query 127096 TTTTAC 127101 || || Sbjct 96022 CTTAAC 96027 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||| || || | || || || || ||||| || ||| Sbjct 95159 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 95218 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 95219 GCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 95278 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | |||||||| |||| || | || || || |||| ||| Sbjct 95279 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGT 95337 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| || ||||| Sbjct 95338 CTTGACAAAGATTTGCAT 95355 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||| || || | || || || || ||||| || ||| Sbjct 95387 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 95446 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 95447 GCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 95506 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | |||||||| |||| || | || || || |||| ||| Sbjct 95507 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGT 95565 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| || ||||| Sbjct 95566 CTTGACAAAGATTTGCAT 95583 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || || ||||| | |||||| ||| || ||||| || ||| Sbjct 96127 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 96186 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| ||| || |||| Sbjct 96187 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 96246 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| || || | ||| || || | ||| | |||||||| || Sbjct 96247 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 96299 >seq220 Length=92616 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| ||||| ||| ||||| Sbjct 67932 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 67873 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || ||||||||||| ||| ||| || ||||| |||| || Sbjct 67872 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTG-TC 67814 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 67813 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 67754 Query 127105 A 127105 | Sbjct 67753 A 67753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499195184800