Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq246 219 5e-52
seq182 87.8 2e-12
seq263 82.4 9e-11
>seq246
Length=965961
Score = 219 bits (242), Expect = 5e-52
Identities = 577/868 (66%), Gaps = 27/868 (3%)
Strand=Plus/Plus
Query 110272 ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG 110331
||||| ||||||| || | || || || ||||| |||| ||| || | | ||
Sbjct 485538 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 485597
Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391
|| || | ||| || || |||| |||||| || ||| ||||| ||||||||| ||
Sbjct 485598 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 485657
Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451
|| |||||| |||||||| ||||||||| | ||| ||||||| || ||||| | |
Sbjct 485658 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 485717
Query 110452 TTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTTC 110507
| ||||||||| | ||| | | || | | | | | ||| |||| || | | || ||
Sbjct 485718 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCG---GCCACGGCCCTC 485773
Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567
|| ||||||||| | ||| | | || || || | ||||| ||||||| || ||
Sbjct 485774 CTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGG 485833
Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAA 110624
|||| || |||||||||||| | ||| | |||| | ||||||| | |||||||||
Sbjct 485834 GGCCTCGTTGGGACAGAAGAGTGTCCAGT---CACCGTTGGCCTCAACGCGCTTCATGAA 485890
Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684
|| || ||| |||||| || |||| ||||||||| |||| |||| || | ||| ||
Sbjct 485891 GAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTG 485950
Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744
||| || || || | || || | || ||| | |||||| || || || |||| ||
Sbjct 485951 GTTCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGC 486010
Query 110745 GATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798
| | || | | || ||| |||||| ||||||||| || ||| || ||
Sbjct 486011 AAAAGCGCC---AGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAA 486067
Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858
|| | |||||||||| ||| || | ||| || || || || | ||| ||
Sbjct 486068 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACC 486127
Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918
| || |||||| ||||| | || ||| ||||| || || ||| || ||
Sbjct 486128 GGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGC 486187
Query 110919 ACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977
||| ||| |||| || |||| ||||| ||||| ||||| | | ||| || |
Sbjct 486188 ACAGGTCT-TGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGA 486246
Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037
||||||| | | ||| || | || || | |||||||| | || || | || |||
Sbjct 486247 AGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAG 486306
Query 111038 TGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096
|||| || | ||||||||| || |||||| || | || | || | |||
Sbjct 486307 TGAA-GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCG 486365
Query 111097 TGAATACCAATGGCAACTCGCATGAACA 111124
||||| || | |||||| ||||||| ||
Sbjct 486366 TGAATTCCGACGGCAACACGCATGAGCA 486393
>seq182
Length=422826
Score = 87.8 bits (96), Expect = 2e-12
Identities = 330/507 (65%), Gaps = 23/507 (5%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|||||||| || || || || | || || | || |||| ||| ||||| ||| ||
Sbjct 71306 CGATCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCG 71247
Query 11563 GCAATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619
|| | ||| || | ||| || | | | ||| || ||||| || || |||| ||||
Sbjct 71246 GCCAGGACAACCACTTGC---TCGGAGGTATTGAAGCCATCCATCTCAGTAAGAATCTGG 71190
Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCAT-ACCACCTGCCGAAC--GCTT---- 11672
|||| || ||||||||| ||||| || |||| | ||| |||
Sbjct 71189 TTGAGAGTGCTTTCACGCTCGTCGTTTC----CACCACCAACGTTCGACTTTGCTCGGGA 71134
Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
||| || | ||| || || ||||| ||||| | ||| || || ||| || || |
Sbjct 71133 CTTTCCAATAGCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTCCGGGCATT 71074
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792
|||| || || || ||||| | || ||||| || ||||| || ||||| | |
Sbjct 71073 GGCGAAGAGGTCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTCGGA 71014
Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
|| |||||| | ||| || || ||| |||||||| |||| ||| || | |
Sbjct 71013 ACCACTGACACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAACG 70955
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909
||||||| || || || | ||| | ||||| || |||||||||||||| ||||| ||
Sbjct 70954 TCTTACCAGTTCCGGGGGGACCTGAGAGAATAGCACCACGGGGGATCTTTGCACCCAGCT 70895
Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
|| | | ||||| || | || ||||||| || | ||| | || |||||||
Sbjct 70894 TC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTGGC 70837
Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996
||| || || |||| |||| |||
Sbjct 70836 TTCGTCCATGCCGGCAACGTCGGAGAA 70810
>seq263
Length=109146
Score = 82.4 bits (90), Expect = 9e-11
Identities = 145/210 (69%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || || |||||||| ||||| || ||| || |||||||| || ||
Sbjct 78858 TGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCA 78917
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| ||||||| || ||||| |||||||| ||||| ||| |
Sbjct 78918 CGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCG 78977
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGAC----TTGTCGAACCACTTGAGAGC 119683
||||| || | |||||| ||| |||| | || | | || || ||| ||| ||
Sbjct 78978 GCGAAGGCAACCAGACGCGAAGCGAAAGTT-GACTCGCGGTCGTTGATCCAGCGGAGGGC 79036
Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713
|||||||||||| | |||||||| ||
Sbjct 79037 CCAGTTGGCCTTCTTGGCAATGCAGGGAAC 79066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974012206000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |