Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq199 86.0 5e-11
seq90 86.0 5e-11
>seq199
Length=176625
Score = 86.0 bits (94), Expect = 5e-11
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| ||||| || ||||| |||||||||||||| || || |
Sbjct 95822 AGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGA 95881
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||||||||| || || || || || ||||| | |||||| || || ||||| || ||
Sbjct 95882 CCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCC 95941
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435
|| || || || || || || ||||| ||||| | | | || ||||| ||
Sbjct 95942 TTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGAC-CTCGAGGGT 96000
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGA 563464
| ||| || ||||| || || |||||||
Sbjct 96001 GATAGTCTTTCCAGTTAGGGTCTTAACGA 96029
>seq90
Length=108262
Score = 86.0 bits (94), Expect = 5e-11
Identities = 172/255 (67%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
||||| ||| | |||||||| || ||||| ||||| | | ||| |||||
Sbjct 55757 GGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACCGCATTGAA 55698
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||| || || |||||| | || || || || | || |||||| || ||
Sbjct 55697 ATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCACCGACACC 55638
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177
|| | | | | |||||||| || || | |||| | | || || ||| ||| |
Sbjct 55637 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAACACTGTC 55578
Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237
|| |||||||| ||| | ||||| | | || | ||| | || ||||| ||||||
Sbjct 55577 TTCGATGCTAAGCGTCTCATTGGTCGCCGCTTCCAGGATGCTGAGGTCCAGGCCGATATG 55518
Query 550238 AAGCATTGGCCTTTC 550252
||||| |||||||||
Sbjct 55517 AAGCACTGGCCTTTC 55503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029281721182300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |