Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq199 86.0 5e-11 seq90 86.0 5e-11 >seq199 Length=176625 Score = 86.0 bits (94), Expect = 5e-11 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| ||||| || ||||| |||||||||||||| || || | Sbjct 95822 AGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGA 95881 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || || || || || ||||| | |||||| || || ||||| || || Sbjct 95882 CCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCC 95941 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 || || || || || || || ||||| ||||| | | | || ||||| || Sbjct 95942 TTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGAC-CTCGAGGGT 96000 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGA 563464 | ||| || ||||| || || ||||||| Sbjct 96001 GATAGTCTTTCCAGTTAGGGTCTTAACGA 96029 >seq90 Length=108262 Score = 86.0 bits (94), Expect = 5e-11 Identities = 172/255 (67%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | |||||||| || ||||| ||||| | | ||| ||||| Sbjct 55757 GGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACCGCATTGAA 55698 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||| || || |||||| | || || || || | || |||||| || || Sbjct 55697 ATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCACCGACACC 55638 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | | |||||||| || || | |||| | | || || ||| ||| | Sbjct 55637 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAACACTGTC 55578 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 || |||||||| ||| | ||||| | | || | ||| | || ||||| |||||| Sbjct 55577 TTCGATGCTAAGCGTCTCATTGGTCGCCGCTTCCAGGATGCTGAGGTCCAGGCCGATATG 55518 Query 550238 AAGCATTGGCCTTTC 550252 ||||| ||||||||| Sbjct 55517 AAGCACTGGCCTTTC 55503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029281721182300