Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq199 109 4e-19
>seq199
Length=176625
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
|||||| | || |||||||||| || || ||| ||| || || ||||| || || ||
Sbjct 94900 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGA 94959
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | || |||| |||| ||||||||| || || || || ||||| || || | |||
Sbjct 94960 GAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGG 95019
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
|| |||||||||||| ||||| || || | | | ||||| ||| ||
Sbjct 95020 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGAC 95079
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| | || || || ||||| |||||||| || ||||| || |||||
Sbjct 95080 CTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95127
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| || |||||||| || || || ||| | || |||| |||| ||||
Sbjct 95153 TGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGC 95212
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
||||| || || || || ||||| || || | ||||| |||||||||||| |||||
Sbjct 95213 TTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTG 95272
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
|| || | | | ||||| ||| ||||| | || || || ||||| |||
Sbjct 95273 GACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTC 95332
Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766
||||| || ||||| || |||||
Sbjct 95333 AAAGTCTTGACAAAGATTTGCAT 95355
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| || |||||||| || || || ||| | || |||| |||| ||||
Sbjct 95381 TGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGC 95440
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
||||| || || || || ||||| || || | ||||| |||||||||||| |||||
Sbjct 95441 TTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTG 95500
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
|| || | | | ||||| ||| ||||| | || || || ||||| |||
Sbjct 95501 GACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTC 95560
Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766
||||| || ||||| || |||||
Sbjct 95561 AAAGTCTTGACAAAGATTTGCAT 95583
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| |||||| |||||||| |||||||| || | ||| | || || | ||||
Sbjct 95609 TGAAGTGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTACGACCATCTTCAAGCTGC 95668
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
|| || || || || || || || || || | ||||| |||||||||||| |||||
Sbjct 95669 TTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTG 95728
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
|| || | | | ||||| ||| ||||| | || || || ||||| |||
Sbjct 95729 GACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGTC 95788
Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766
||||| || ||||| || |||||
Sbjct 95789 AAAGTCTTGACAAAGATTTGCAT 95811
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| |||||| ||||||||||||||||| || | ||| | || || | ||||
Sbjct 95837 TGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTGC 95896
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| || || || || || || || || || | ||||| ||||||||||||
Sbjct 95897 TTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC 95946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936346477210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |