Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq199 120 2e-21 >seq199 Length=176625 Score = 120 bits (132), Expect = 2e-21 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| |||||||| ||||| || ||| ||||||| || || Sbjct 95818 ACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGT 95877 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||| ||||| || ||||||||||| || || || ||||| || Sbjct 95878 ACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCC 95937 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| ||||| ||||| ||||| | | | | | || | Sbjct 95938 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA-CCTCGA 95996 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 |||| ||||| || || || || |||||||||| Sbjct 95997 GGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 96029 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| |||||||| ||||| || ||||||||||| || || Sbjct 95590 ACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 95649 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||| ||||| || ||||||||||| || || || ||||| || Sbjct 95650 ACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCC 95709 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| ||||| ||||| ||||| | | | | | || | Sbjct 95710 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA-CCTCGA 95768 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || | |||||| || || ||||| Sbjct 95769 GTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTG 95808 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| | || || | ||| ||||| ||||| ||||| || |||||||| || Sbjct 96145 TTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 96204 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| || |||||||| || ||||| ||||| || |||||||| Sbjct 96205 TGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCG 96264 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || | |||||||| || ||||| || |||| Sbjct 96265 CTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGA 96301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268167618389960