Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq246 104 2e-17
seq199 91.5 1e-13
>seq246
Length=965961
Score = 104 bits (114), Expect = 2e-17
Identities = 401/623 (64%), Gaps = 13/623 (2%)
Strand=Plus/Plus
Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360
|||||||||| ||||||| ||||||| ||||||||| | |||| || || |
Sbjct 485776 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 485835
Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420
|| || ||||| | ||| | ||| | ||||| |||| |||||| ||||||| ||||
Sbjct 485836 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 485895
Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTAC 139480
| ||| ||||||||||| | | | || || || || ||| ||| |||
Sbjct 485896 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 485955
Query 139481 GTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTG 139540
|| | |||||| || || || || |||||||| || ||||| |||||||| | |
Sbjct 485956 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 486015
Query 139541 CGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCA 139597
|||| || ||| ||||| || || || | || | | || || || || ||||
Sbjct 486016 CGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCA 486075
Query 139598 ACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAG 139654
||| || | | |||| | | | |||||||| | || ||| | || | | ||
Sbjct 486076 GCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGT---AG 486132
Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-A 139713
| || | | || || || | ||||| ||||| | ||||| || | | ||
Sbjct 486133 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 486192
Query 139714 TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGT-GACCAGAAAGCA 139772
|| | | || || || ||||| |||||||| | || ||| ||||| |||||
Sbjct 486193 TCTTG-AGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCA-CGTCAACCAGGAAGCA 486250
Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832
|| | ||| || || | || |||| |||| ||| || ||||| |||||
Sbjct 486251 AGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA 486310
Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892
| | |||||||| | ||| || || ||||| || |||| ||| ||||| ||
Sbjct 486311 GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAAT 486370
Query 139893 ACCGACAGAGACTCGCATCAGCA 139915
||||| | || ||||| ||||
Sbjct 486371 TCCGACGGCAACACGCATGAGCA 486393
>seq199
Length=176625
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | || || || || || || ||||| || || | |
Sbjct 95127 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 95068
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 95067 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 95008
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||||||||| | | | || || |||||
Sbjct 95007 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 94948
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| |||||||||| |||| || |||
Sbjct 94947 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGGC 94900
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || ||||| || || || || || || ||| ||| || | || | || ||
Sbjct 96299 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 96240
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || ||||| || || || ||| | ||||| || || ||
Sbjct 96239 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 96180
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| | | | | || ||||||||||| |||||||| || || || |||
Sbjct 96179 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCCAC 96120
Query 24908 TTGGT 24912
||||
Sbjct 96119 CTGGT 96115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896081595600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |