Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq246 104 2e-17 seq199 91.5 1e-13 >seq246 Length=965961 Score = 104 bits (114), Expect = 2e-17 Identities = 401/623 (64%), Gaps = 13/623 (2%) Strand=Plus/Plus Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360 |||||||||| ||||||| ||||||| ||||||||| | |||| || || | Sbjct 485776 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 485835 Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420 || || ||||| | ||| | ||| | ||||| |||| |||||| ||||||| |||| Sbjct 485836 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 485895 Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTAC 139480 | ||| ||||||||||| | | | || || || || ||| ||| ||| Sbjct 485896 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 485955 Query 139481 GTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTG 139540 || | |||||| || || || || |||||||| || ||||| |||||||| | | Sbjct 485956 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 486015 Query 139541 CGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCA 139597 |||| || ||| ||||| || || || | || | | || || || || |||| Sbjct 486016 CGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCA 486075 Query 139598 ACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAG 139654 ||| || | | |||| | | | |||||||| | || ||| | || | | || Sbjct 486076 GCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGT---AG 486132 Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-A 139713 | || | | || || || | ||||| ||||| | ||||| || | | || Sbjct 486133 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 486192 Query 139714 TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGT-GACCAGAAAGCA 139772 || | | || || || ||||| |||||||| | || ||| ||||| ||||| Sbjct 486193 TCTTG-AGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCA-CGTCAACCAGGAAGCA 486250 Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 || | ||| || || | || |||| |||| ||| || ||||| ||||| Sbjct 486251 AGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA 486310 Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892 | | |||||||| | ||| || || ||||| || |||| ||| ||||| || Sbjct 486311 GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAAT 486370 Query 139893 ACCGACAGAGACTCGCATCAGCA 139915 ||||| | || ||||| |||| Sbjct 486371 TCCGACGGCAACACGCATGAGCA 486393 >seq199 Length=176625 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || || || || || || ||||| || || | | Sbjct 95127 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 95068 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || ||||| || Sbjct 95067 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 95008 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||||||||| | | | || || ||||| Sbjct 95007 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 94948 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| |||||||||| |||| || ||| Sbjct 94947 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGGC 94900 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || ||||| || || || || || || ||| ||| || | || | || || Sbjct 96299 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 96240 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || || || ||| | ||||| || || || Sbjct 96239 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 96180 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| | | | | || ||||||||||| |||||||| || || || ||| Sbjct 96179 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCCAC 96120 Query 24908 TTGGT 24912 |||| Sbjct 96119 CTGGT 96115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896081595600