Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq246 134 2e-25 seq263 122 1e-21 seq209 105 1e-16 seq258 102 1e-15 >seq246 Length=965961 Score = 134 bits (148), Expect = 2e-25 Identities = 290/437 (66%), Gaps = 12/437 (3%) Strand=Plus/Plus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| ||| | ||| ||||||||||||| | || | || |||||||||| |||||| Sbjct 485599 ACTCGACAATCTCAGTGCACAGGTTGGAG--CTGCGAATAGTACCCAGGTTCTTCTGGTT 485656 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 || || |||| || ||||||| |||||| |||| ||| ||||| |||| || Sbjct 485657 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGC 485716 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747 | || ||||| |||| | || | || || || ||| ||||||| Sbjct 485717 CTCGAGAATGGCGTACCAGA----GCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCT 485772 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 |||| ||||| || | | |||| | || |||||||| Sbjct 485773 CCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGG 485832 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867 | |||||| || || ||||| | |||||| ||| | | | ||||| ||| || | Sbjct 485833 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 485892 Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927 | ||| ||||||| |||| ||||| || || || || ||||||||| ||||||| Sbjct 485893 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 485952 Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987 |||| ||| || || | |||| || |||||||||||||||||||||||| ||||| Sbjct 485953 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 486012 Query 2071988 AGGCGCCCTTGCGCTTG 2072004 | ||||| ||||||| Sbjct 486013 AAGCGCCAGGGCGCTTG 486029 >seq263 Length=109146 Score = 122 bits (134), Expect = 1e-21 Identities = 177/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 78541 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 78600 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 78601 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 78660 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| || ||||||| ||||||||| || ||||| Sbjct 78661 GAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCA 78720 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || | ||| || | || | | ||||| | ||| || ||||||||| Sbjct 78721 TGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCT 78780 Query 794131 CGATGATGAT 794140 | | ||||| Sbjct 78781 CAACAATGAT 78790 >seq209 Length=324427 Score = 105 bits (116), Expect = 1e-16 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||| ||||| || |||||| | ||||| || | || || |||||||| || ||| Sbjct 121616 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 121675 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | || ||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 121676 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 121726 >seq258 Length=104115 Score = 102 bits (112), Expect = 1e-15 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 79624 GTACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 79565 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || ||||| | |||||||||||| |||| | ||| || |||||| || | Sbjct 79564 GATGAGACGCACAGAGGTCTGGATCTCCCGGGAGGAGATAGTAGACTTCTTGTT-GTAAG 79506 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | ||||| | ||||||||| ||| || |||| ||||| Sbjct 79505 CGGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC 79463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916217678868530