Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq246 95.1 3e-14 seq199 89.7 1e-12 >seq246 Length=965961 Score = 95.1 bits (104), Expect = 3e-14 Identities = 168/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| |||||||| ||||| ||| | |||||| | | |||| || | Sbjct 485673 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 485732 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | || | | | | || || | ||||| || | ||| Sbjct 485733 CAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 485792 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || | || ||||| || || || ||||| ||| Sbjct 485793 AGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAG 485852 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| |||||| | ||| Sbjct 485853 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCG 485912 Query 173347 TAGAA 173351 ||||| Sbjct 485913 TAGAA 485917 >seq199 Length=176625 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| || ||||| ||||| ||||| ||||||| ||||||||| | | ||| Sbjct 94907 CGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTA 94966 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||| || ||||||||||| || ||||||||||| || || || Sbjct 94967 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTG 95010 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||||||||| | |||||| |||| | || | |||||||| Sbjct 95603 ACAAGGTGAAGTGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTACGACCATCTTCA 95662 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| ||||| || Sbjct 95663 AGCTGCTTGCCAGCGAAGATAAGACGTTGCTG 95694 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| | || || || || || || || | || Sbjct 96024 AAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTGACAAC 95965 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || ||| ||| | ||||||||| Sbjct 95964 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTATCTTC 95905 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | |||||||| | || | | |||||||| | ||||||||||| Sbjct 95904 GCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAAGAGTCC 95845 Query 206365 ACTCTTCACCTTGT 206378 || ||||||||||| Sbjct 95844 ACACTTCACCTTGT 95831 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | |||||||| || ||||| | || || || || || || Sbjct 95808 CAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 95749 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || ||| || ||| ||| Sbjct 95748 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 95689 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| | |||||||| | || | | ||||| || | Sbjct 95688 CGTCTTATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTATAATATT 95629 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| || ||||||||||| Sbjct 95628 CAGAAAGAGTCCACACTTCACCTTGT 95603 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||| | ||||||||| | | ||| | ||| || ||| Sbjct 95147 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 95206 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| || || || Sbjct 95207 AGCTGCTTACCAGCGAAGATAAGACGCTGCTG 95238 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||| | ||||||||| | | ||| | ||| || ||| Sbjct 95375 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 95434 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| || || || Sbjct 95435 AGCTGCTTACCAGCGAAGATAAGACGCTGCTG 95466 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||||||||| | ||| || |||| | || | |||||||| Sbjct 95831 ACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCA 95890 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| ||||| || Sbjct 95891 AGCTGCTTGCCAGCGAAGATAAGACGTTGCTG 95922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816711638670