Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28]
270 sequences; 32,065,046 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq220 96.9 3e-15
seq199 95.1 1e-14
>seq220
Length=92616
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || |||||||| || || || |
Sbjct 67934 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 67875
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||| | |||| || |||||| ||| |||||| ||| | ||||
Sbjct 67874 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGAC-GTTG 67816
Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||||| || || || | || || || |||||||||| || || ||
Sbjct 67815 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 67756
Query 35726 AA 35727
||
Sbjct 67755 AA 67754
>seq199
Length=176625
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | |||||||| || | || |||||| || || || || || |
Sbjct 94901 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 94960
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||||||||||||| || || || | ||||||||||| | |||
Sbjct 94961 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 95020
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| || |||||||||| |||||| ||| | |||| | | || || |||| ||
Sbjct 95021 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TC 95076
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | ||||| || || || |||||||| || ||||| || |||||
Sbjct 95077 GACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 95127
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||| || || || | | || || |||| |||||||||||||| || ||
Sbjct 95164 CTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 95223
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | |||| || |||||||||| |||||| ||| | ||
Sbjct 95224 GATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 95282
Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
|| | | || || |||| || ||||| | ||||| || || || |||||||| |
Sbjct 95283 TGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCT 95339
Query 35721 TCACAAATATCTGCAT 35736
| ||||| || |||||
Sbjct 95340 TGACAAAGATTTGCAT 95355
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||| || || || | | || || |||| |||||||||||||| || ||
Sbjct 95392 CTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 95451
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | |||| || |||||||||| |||||| ||| | ||
Sbjct 95452 GATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 95510
Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
|| | | || || |||| || ||||| | ||||| || || || |||||||| |
Sbjct 95511 TGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCT 95567
Query 35721 TCACAAATATCTGCAT 35736
| ||||| || |||||
Sbjct 95568 TGACAAAGATTTGCAT 95583
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| ||||| ||||| | | ||| || | || || |||||||| || || ||
Sbjct 96132 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 96191
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||||| | |||||||||| |||||| ||| | ||
Sbjct 96192 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 96250
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | || ||||| || || ||||| | ||||| ||||| || ||
Sbjct 96251 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 96299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792078571600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |