Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq246 275 8e-69 seq263 84.2 3e-11 >seq246 Length=965961 Score = 275 bits (304), Expect = 8e-69 Identities = 588/872 (67%), Gaps = 15/872 (2%) Strand=Plus/Plus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||||| | || ||||||| || |||| ||||| |||||| |||||| | || Sbjct 485538 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 485597 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 ||||| | ||| || || || | |||||| || ||| || |||| ||||| |||||| Sbjct 485598 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 485657 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 |||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 485658 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 485717 Query 111401 TTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCG 111458 | |||||| || | ||| | | || | | | || || | ||| | | || |||||| Sbjct 485718 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG--GCCACGGCCCTCCT 485775 Query 111459 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 111518 ||||||||| | |||||| || || ||||| ||||| | || | || || || | Sbjct 485776 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 485835 Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578 ||| || |||||||| || | ||| | ||| ||||||| ||||||||||| || | Sbjct 485836 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 485895 Query 111579 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 111638 | ||| |||||| | | ||||| || | ||| |||| || | ||| ||||| Sbjct 485896 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 485955 Query 111639 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | ||||||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 485956 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 486015 Query 111699 ATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 111752 || ||| | ||| | || | |||||||| || ||| |||||| || | Sbjct 486016 CGCCAGGGCGCTTGTTA---CCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 486072 Query 111753 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 111812 | ||||| |||| |||||| | || || || || || | ||| || | | Sbjct 486073 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 486132 Query 111813 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 111872 | | | |||| || || || ||||| ||||| ||| ||||| ||||| Sbjct 486133 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 486192 Query 111873 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 111932 | | ||||| |||||||||| | || ||| | | | | | ||||||||| Sbjct 486193 TCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAG 486252 Query 111933 TGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA 111992 | | ||| || || ||| | |||||||| | || || | |||||| |||| Sbjct 486253 ATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-G 486311 Query 111993 TACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 112051 ||| | ||||||||| || ||||||||| | | | |||||||| || ||||| || Sbjct 486312 TACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATT 486371 Query 112052 CCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||| || || ||||||| || || ||| || Sbjct 486372 CCGACGGCAACACGCATGAGCAAGTGCTGAGG 486403 >seq263 Length=109146 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || ||||| || || ||||| || || Sbjct 78857 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCC 78916 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | |||||| || ||||||||||||||||| ||| Sbjct 78917 ACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 78976 Query 122790 CGCAAACGCAA 122800 || || |||| Sbjct 78977 GGCGAAGGCAA 78987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029880392000