Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq246 242 4e-59 seq264 140 4e-28 >seq246 Length=965961 Score = 242 bits (268), Expect = 4e-59 Identities = 516/764 (68%), Gaps = 10/764 (1%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || ||| | || || ||||| || ||| | | | Sbjct 486403 CCTCAGCACTTGCTCATGCGTGTTGCCGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 486344 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||| ||| |||| ||| ||| |||||||| || |||||| | || || ||||| Sbjct 486343 ATTGAGACATACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCCACTTTGTTC 486284 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || | ||| || || ||| | | ||||||||||| | ||| | ||| Sbjct 486283 AATGCCGCTACTCCCCAGCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGAC 486224 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || || ||||| || || |||||| |||||| ||||||||| | || Sbjct 486223 AGCATTGAGGGTATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGC 486164 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||||| | || || | || | || || | ||| | || || || | Sbjct 486163 GGTATCGGTCTGAACG--TCCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCA 486106 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 ||||| | || | || || || |||||||| || || || |||||||| ||||| || | Sbjct 486105 ACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATG 486046 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | ||||||||||| |||||| || | || ||||||||||| ||||||||||||| Sbjct 486045 TTGACCAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACG 485986 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 |||| | | ||||| || || ||||| ||| || ||| | || ||| | || || Sbjct 485985 CCGATGTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCC 485926 Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 ||||||| || ||| ||| |||||| ||| || ||||||||| | || ||| || Sbjct 485925 GTGACCTCTTCTAC-GCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAAC 485867 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 | || ||| || | || || |||||| ||||||||| | |||||||||||| Sbjct 485866 GGTGACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGAT 485807 Query 53777 GAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCA 53834 ||||| ||| | || || |||| |||| ||||||| | |||| ||| Sbjct 485806 GAGTTCGACGCTCTCTACGCGAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACTATCA 485749 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 |||| | || | ||| | || || ||| || ||| ||||| || | || | || Sbjct 485748 AGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCA 485689 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || |||||||||| | |||| ||||||| |||||||||||| Sbjct 485688 TGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 485645 >seq264 Length=463512 Score = 140 bits (154), Expect = 4e-28 Identities = 295/440 (67%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||||||||| || || || || |||||||||||||| |||||||| | ||| | Sbjct 379919 CCAGTTCCGATACCATCCGCGCCGTTGATCAGAATCATCGGGACGACAGGCATAAAGACC 379860 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | || ||||| | ||| | || | | | || || | Sbjct 379859 TCGGGCTCAATTTTCTTGCCATCGTCTTCGTTGTATGTTAGTAGTGGCTCATCGGCCGTA 379800 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| || || | | || | ||||||||| | |||||||||| || ||| | Sbjct 379799 TGGAAGATTTTGCGTGCAAAGGGGGACAGGCGAGTGTAGATGTAACGAGCACTGGCACAA 379740 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || || ||||| ||| || |||| || | |||||| ||||| | | ||| | ||| Sbjct 379739 TCATTACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCTAGGCAGTTGATATTG 379680 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 |||| ||| |||||| | || || | || || || || ||| | || || Sbjct 379679 TTGGAGCCAACAAAGGTCTGGGCAAGACCAACGATAGTCTGCTGAAGGGAGACGTCGCCG 379620 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 ||||| || || ||| | | || | || ||||||| | ||||||||||||| | Sbjct 379619 TGGTGGTAGGCTGTCATTCCGGATACATGACCTGCCAGCTCAACCACCTTCATGTCCTTC 379560 Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 |||| || || |||| | || |||||||||||||| ||||||| |||||| Sbjct 379559 TTCAGATTACGGCGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTTCAAACCATCG 379500 Query 117572 GCCACGTGAGGGATCGAACG 117591 | ||| |||||||||||| Sbjct 379499 ACAACGGAAGGGATCGAACG 379480 Score = 102 bits (112), Expect = 9e-17 Identities = 200/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || ||| ||||||| || | ||||| ||| || |||||| || || | ||||| Sbjct 379769 CGAGTGTAGATGTAACGAGCACTGGCACAATCATTACCACCTTGAAGTCGACTACCAAAG 379710 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||||| ||| ||||| ||||||| ||| || || |||| || | | Sbjct 379709 TTTCCACTAGGCTCTAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGGGCAAGACCA 379650 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 || || || ||| || | || |||||||| || || ||| |||| ||| || Sbjct 379649 ACGATAGTCTGCTGAAGGGAGACGTCGCCGTGGTGGTAGGCTGTCAT-TCCG-GATACAT 379592 Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263 || |||| || |||||||||||||| || |||| || || ||||| || || Sbjct 379591 GACCTGCCAGCTCAACCACCTTCATGTCCTTCTTCAGATTACGGCGGAAACAGGTGTGAA 379532 Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 |||||||||||| || |||||||| || || ||| ||| |||||||| Sbjct 379531 GCACCTTGCGCTGACCGGGCTTCAAACCATCGACAACGGAAGGGATCGAACG 379480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214153146000