Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq199 174 4e-38 seq220 114 3e-20 seq101 87.8 4e-12 >seq199 Length=176625 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | |||||||| || ||||| |||||||| || |||||||| Sbjct 95808 CAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 95749 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || || ||||||||| Sbjct 95748 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 95689 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| |||||||| | || ||| | |||||||| | Sbjct 95688 CGTCTTATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTATAATATT 95629 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || ||||| || ||||| Sbjct 95628 CAGAAAGAGTCCACACTTCACCTTGT 95603 Score = 165 bits (182), Expect = 2e-35 Identities = 156/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || |||||||||||||| || |||||||| ||||| | Sbjct 96029 TCGTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTG 95970 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||| |||||||| || || || || || ||||||||||| |||| Sbjct 95969 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTA 95910 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || ||||| |||||||| | || ||| | ||||| || | || |||| Sbjct 95909 TCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAAG 95850 Query 178111 AATCAACACTGCATCTTGT 178129 | || ||||| || ||||| Sbjct 95849 AGTCCACACTTCACCTTGT 95831 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || ||||| |||||||| || |||||||| Sbjct 95352 CAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 95293 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 95292 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 95233 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | ||||| | || ||||| | Sbjct 95232 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATT 95173 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || ||||| Sbjct 95172 CAGAAGGAGTCCACACTTCACCTTGT 95147 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || ||||| |||||||| || |||||||| Sbjct 95580 CAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 95521 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 95520 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 95461 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | ||||| | || ||||| | Sbjct 95460 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATT 95401 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || ||||| Sbjct 95400 CAGAAGGAGTCCACACTTCACCTTGT 95375 Score = 149 bits (164), Expect = 2e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || ||||| |||||||| || |||||||| Sbjct 95124 CAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 95065 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 95064 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 95005 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | ||||| | || ||||| || Sbjct 95004 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATC 94945 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 94944 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 94915 Score = 134 bits (148), Expect = 3e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || ||||| |||||||| ||||| || | || || ||||| |||||||| Sbjct 96301 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGT 96242 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || || ||||| |||||||| || ||||||||||| || | Sbjct 96241 CCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 96182 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || ||| | ||||||||| ||||||| || || || || | Sbjct 96181 AGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCC 96122 Query 178123 ATCTTGT 178129 | || || Sbjct 96121 ACCTGGT 96115 >seq220 Length=92616 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 67753 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 67809 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || || || || || || |||||||| || Sbjct 67810 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 67869 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 67870 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 67929 Query 178106 AAA 178108 || Sbjct 67930 GAA 67932 >seq101 Length=1008413 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || |||||||| || || ||||||||||| || |||||||| Sbjct 726546 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 726605 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | ||||| | ||||| ||| |||| || || || || || || || || Sbjct 726606 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 726661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727035842380