Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq220 138 1e-27 seq199 114 1e-20 seq101 105 6e-18 >seq220 Length=92616 Score = 138 bits (152), Expect = 1e-27 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| | Sbjct 67934 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 67875 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||| ||||| | ||||| || |||||| ||| ||| || ||| ||| | Sbjct 67874 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT-GACGTTG 67816 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 67815 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 67756 Query 41852 AAA 41854 ||| Sbjct 67755 AAA 67753 >seq199 Length=176625 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| |||||||||||| |||||||| ||| Sbjct 95129 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 95188 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| || ||||| || || ||||| ||||| | |||| Sbjct 95189 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 95248 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 95249 ATGCCCTCCTTGTCCTGGATCTT 95271 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| |||||||||||| |||||||| ||| Sbjct 95357 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 95416 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| || ||||| || || ||||| ||||| | |||| Sbjct 95417 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 95476 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 95477 ATGCCCTCCTTGTCCTGGATCTT 95499 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||||| || || ||| |||||| || |||||||| || || Sbjct 96097 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 96156 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 96157 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 96216 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||| ||||| ||||| || Sbjct 96217 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTATCGCTGGACTCAAC 96275 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || ||||| || || Sbjct 96276 CTCAAGGGTGATGGTTTTGCCAGT 96299 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| ||| |||||||| ||||| || || Sbjct 95585 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTATAATCAGAA 95644 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| ||||| || || || || ||||| | |||| Sbjct 95645 AGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 95704 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 95705 ATGCCCTCCTTGTCCTGGATCTT 95727 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| ||| |||||||| || || || || Sbjct 95813 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAA 95872 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| ||||| || || || || ||||| | |||| Sbjct 95873 AGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 95932 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 95933 ATGCCCTCCTTGTCCTGGATCTT 95955 >seq101 Length=1008413 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| || || Sbjct 726683 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 726624 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||||| ||||| | || |||||||||||||||||||| ||||||||||| ||||| | Sbjct 726623 CGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 726564 Query 41752 GGGAACGCTCTCCTTGTCCAT 41772 ||| | | ||||||||| || Sbjct 726563 GGGGATACCCTCCTTGTCTAT 726543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302439724000