Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq217 206 3e-48
seq113 118 1e-21
seq125 98.7 1e-15
seq168 95.1 1e-14
>seq217
Length=559249
Score = 206 bits (228), Expect = 3e-48
Identities = 322/455 (71%), Gaps = 4/455 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||| | ||||| || ||||||||| || | | ||| | | |||| ||| |
Sbjct 31726 AGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACTTTCGCTTCGCGTC 31785
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || |||||||| ||||||| || ||| |||||| |||| || |
Sbjct 31786 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 31845
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || ||||| ||||| |||||||||||| ||||||||| ||||| | |
Sbjct 31846 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 31905
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220
|||||||||| || ||||| |||||| |||||||| || || || || |||
Sbjct 31906 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 31965
Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280
| | | | ||| ||| ||| | || || |||| ||| |||||| |||||
Sbjct 31966 ATCCTAAGGTGGTTCA-GGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTT 32024
Query 117281 ACCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339
|| || || || || ||| ||||||| || | || | | | |||| | |||||
Sbjct 32025 ACTGACGCTCTTCC-CTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGAGTACAT 32083
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399
|||||||||||| ||| | |||||| | | || | | | ||| |||||||| | |
Sbjct 32084 CGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACTACAACGCTAC 32143
Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
|||||| | ||||| ||| | ||||||| |||
Sbjct 32144 CAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 32178
Score = 205 bits (226), Expect = 1e-47
Identities = 216/284 (76%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||
Sbjct 31322 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 31381
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | ||| |||||||| | ||||| | |||||
Sbjct 31382 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATTTCC 31441
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| ||||||||| |||||| || ||||||||||| || |||||||||
Sbjct 31442 CACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 31501
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | ||||||| || |||||||||||||| |||||| |||
Sbjct 31502 TTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 31561
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
|||||| | ||||| || | || || ||||||||||| ||
Sbjct 31562 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTA 31605
>seq113
Length=217578
Score = 118 bits (130), Expect = 1e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | |
Sbjct 66837 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 66896
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | || || |||||||| ||| | |||||||| || ||
Sbjct 66897 GACAACG-TCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 66955
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || || | |||||||| | ||||||||||||||||||
Sbjct 66956 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 67015
Query 40878 GG 40879
||
Sbjct 67016 GG 67017
>seq125
Length=321378
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAAG 40770
|||| ||||||||||||||| | || || || ||| ||| | | | |||| |||||
Sbjct 320883 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 320941
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| ||||| || || | |||||||| || || |||| ||| |||
Sbjct 320942 TCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGC 321001
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || || | |||||||| || || |||||||| |||||| |||| ||
Sbjct 321002 AAGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTC 321061
Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| || || | ||| | | |||||
Sbjct 321062 CACCTGGTCCTTCGCCTCCGTGGCGG 321087
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/200 (72%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || || || || |||||| |||| ||||| | | || | | |
Sbjct 321155 TCGTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTG 321214
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| ||||| || || | ||||| |||||||| ||| | ||||||||||| ||
Sbjct 321215 ACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTT 321273
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| ||||| || || | || ||||| || ||||| || |||||
Sbjct 321274 ATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAA 321333
Query 40879 GAGGCCACGCTGCATCTAGT 40898
||| |||| || || || ||
Sbjct 321334 GAGTCCACACTTCACCTTGT 321353
>seq168
Length=626069
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| ||
Sbjct 290113 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 290054
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| ||| || |||||||||||||||||| | || || || || || |
Sbjct 290053 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 289994
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 289993 CGCCTGCGTGGTGGTGG 289977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515216739828320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |