Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq113 107 2e-18
seq125 104 2e-17
seq168 86.0 5e-12
>seq113
Length=217578
Score = 107 bits (118), Expect = 2e-18
Identities = 135/182 (74%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||||||||| ||||| ||| ||||
Sbjct 67015 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 66956
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668
|| |||||||| || || || ||||||||||| | ||| | | || || || || | |
Sbjct 66955 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGA--TCTTGGTCTTGACGTTGT 66898
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | |||||| |||| ||| | || || || ||||| || || || |
Sbjct 66897 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 66838
Query 118729 AA 118730
||
Sbjct 66837 AA 66836
>seq125
Length=321378
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||| | ||| |||||||| ||||| |||||||| | || || ||| || |||||
Sbjct 321348 GTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTG 321289
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| |||| ||||| ||||| ||||| || |||||||||||||| || ||
Sbjct 321288 CTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 321229
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | ||| || | |||||||||||||| ||| | || || || ||
Sbjct 321228 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGT 321169
Query 118715 CAGAGTTTTTAC 118726
|| || || ||
Sbjct 321168 TAGGGTCTTAAC 321157
Score = 100 bits (110), Expect = 2e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || ||||| ||||| ||||| ||||| | ||||| ||||||
Sbjct 321069 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 321010
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||| ||||||||||| || ||||| || |||||||||||
Sbjct 321009 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 320950
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| || || || ||| ||||| | ||| | ||||||
Sbjct 320949 ATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTG 320890
Query 118710 CCGGT 118714
|| ||
Sbjct 320889 CCAGT 320885
>seq168
Length=626069
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||||||||| | |||||| |||||||||||| || ||
Sbjct 290010 GTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 290069
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
||| |||| || |||||||| || || || || ||||||||||||
Sbjct 290070 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 290114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828380248344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |