Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq113 96.9 4e-15
seq125 93.3 5e-14
>seq113
Length=217578
Score = 96.9 bits (106), Expect = 4e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || |||||||| || ||||| |
Sbjct 67017 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 66958
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||| ||| ||| || |||| ||| |
Sbjct 66957 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 66899
Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 66898 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 66839
Query 43173 AA 43174
||
Sbjct 66838 AA 66837
>seq125
Length=321378
Score = 93.3 bits (102), Expect = 5e-14
Identities = 137/190 (72%), Gaps = 8/190 (4%)
Strand=Plus/Minus
Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045
|||| ||| || |||||||||||||||| || || || | || || |||||||| ||
Sbjct 321342 TGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTGCTTGCC 321283
Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105
|||||| || || || |||||||||| || | || |||||||||| ||| || ||
Sbjct 321282 AGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 321223
Query 43106 GAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 43161
|| ||| | | | || || |||| || || |||| ||||| || || || ||||
Sbjct 321222 GA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGGGTGATAGTCTTTCCAGTTA 321167
Query 43162 GCGTCTTTAC 43171
| ||||| ||
Sbjct 321166 GGGTCTTAAC 321157
Score = 91.5 bits (100), Expect = 2e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || || ||||| | || || || | || || |||||||| ||||||||
Sbjct 321052 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 320993
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 320992 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 320934
Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | || ||||| || || || || | |||||||||||||| ||
Sbjct 320933 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 320885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571814869570960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |