Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq102 356 2e-93 seq217 127 2e-24 seq125 95.1 1e-14 >seq102 Length=895889 Score = 356 bits (394), Expect = 2e-93 Identities = 1195/1846 (65%), Gaps = 24/1846 (1%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||| |||||||||||||| || || || || Sbjct 481311 TGGTACGCAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCGGCGAAGTGCATGC 481252 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 || | || || | ||| | || || | |||| ||||| |||||||| Sbjct 481251 TGGTGAGCTTGCCCATGGTAGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGA 481192 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | | || || || || |||||||| | | | | ||| || || ||||| |||| Sbjct 481191 TGTAGGCACCGCGGTCAGCGGCCATCTGCAGGATGTTGCGCTGTGAGATCTCCCAGACGG 481132 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 |||||||||| | |||| || || || ||| |||||||||| ||| || Sbjct 481131 TCTTGTACAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGACGGAGCCGCCAT 481072 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 | ||||| || || || | ||| ||||| ||||| | || || || || | Sbjct 481071 CGGCGATGATGCGGTTCTTCATATTGTCGGACCACAGACCGAGGTCGACCAGGTCCTTCA 481012 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || | |||| || || || ||||| || | || ||| ||||| ||| ||||| | Sbjct 481011 GGAGCCAAGGGTTAACGACCTGGAACTCACCAGCCAGGACACGGCGGGAGTAGATGTTCG 480952 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | |||||||| | || ||| ||||| || ||| ||| || || |||| Sbjct 480951 AGGTGTAGGGTTCGAAGCACTCGTTGAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCA 480892 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCG 22622 | || || | ||| || ||| | | || || | ||| || ||| || | Sbjct 480891 TGGGGGCGACCAGCAGACTGTTGCGGACACCAGACTCGGCAATCTTGGCCTTCAGGGAGG 480832 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC-- 22680 ||||||||| ||||||| || || ||||||||| ||||| |||| | ||| Sbjct 480831 CCCAGTCCCAGAGATCGGTGGGGGTGCG---GTCCCACATGTCGTACTGCAGGATGCCCT 480775 Query 22681 GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA 22740 |||| || || ||| |||| || || || | |||| || ||||| ||||| Sbjct 480774 GCGAGACG--GGAGAGCCGGCGTAGGTCTCATATGTACCAAGCTTCTTGGCAATCTCGCA 480717 Query 22741 GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC 22800 | || ||| || |||| || || ||||||||||| | |||| | | || Sbjct 480716 GGAAGCAGTCAAGGCACCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGCTGTCTAGC 480657 Query 22801 GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCC 22860 || | ||| | |||| ||||| || ||| || || || | ||| | || || Sbjct 480656 CTCGGGGGAGTCGAATGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACC 480597 Query 22861 TATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATT 22920 | | | || || |||| | || | || || || || | || || | || Sbjct 480596 GAGAGCAATGGGGCGGTGACGGAAGTTGCTCTTCTTCGCTTCAGGAACGGGGTAGTAGTT 480537 Query 22921 CGAATCGATTGTTCTGTTCAAGTTTCTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNT 22979 ||| || | |||||| ||| || | | || | | | Sbjct 480536 GATATCAATGATCTTGTTCAGGTTG-TGAACGAGAACCTGCACGACCTCGTGGAGCTTGC 480478 Query 22980 CAAAGTCGTAAACGCC-CG---ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGA 23035 ||||||| || |||| || | || ||||| | || || ||||| || || || Sbjct 480477 CAAAGTCATACTCGCCTCGGGCAGAGT-CAACATAAGTGGGGAGGGCGAGGGAAGCCAGG 480419 Query 23036 TTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTA 23095 ||||| || |||||||| || || ||||||| ||||| || || || || ||| Sbjct 480418 TTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCACAGGTTGGAG 480359 Query 23096 CACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGC 23155 | || || |||| || ||||||| || || ||||| | ||||||||||||| Sbjct 480358 CTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGC 480299 Query 23156 ATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCG 23215 ||| | || | || ||||| ||| | ||||| || || ||| | ||||||| Sbjct 480298 ATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCC 480239 Query 23216 TGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274 | | | ||| || | | ||| || | ||||||||| ||| | ||||| || || Sbjct 480238 TTGATA-GTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTC 480180 Query 23275 GGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTG 23333 ||||||| ||| || ||||||||||| | | | ||||| | ||| |||| Sbjct 480179 ATCACCGTAGACA-TCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGTCCAGTCAC 480121 Query 23334 AGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGC 23393 || |||||||| |||| || ||||| || |||| | ||||||||| || || | Sbjct 480120 CGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCAC 480061 Query 23394 GGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCG 23453 |||| || |||||||| || ||| |||||| || ||| | || || || || || | Sbjct 480060 GGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCAAGGAACTCGAAGACATCGG 480001 Query 23454 CATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGA 23513 | ||||||||||| ||||| | |||||| ||||| || | ||| || || ||||| || | Sbjct 480000 CGTGCCACGGCTCCAGGTAGATGGCAAAAGCGCCAGGGCGCTTGTTACCACCCTGGTCAA 479941 Query 23514 CGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGC 23573 | || ||||| |||||||| |||| | ||||| || || | ||||||||| | |||| Sbjct 479940 CATAGCGGGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCG- 479882 Query 23574 CTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCT 23632 | || ||| | |||||| | || |||| | ||| |||| | ||| || || Sbjct 479881 TTGGTTCCACCAATGTACGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCG 479822 Query 23633 CCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTG 23692 || | | || || ||||| || || || |||||||| ||||| ||||| |||||| Sbjct 479821 CCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTG 479762 Query 23693 TC--CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCG 23750 || | || || | |||| ||| || || | | || | | ||| |||||||| Sbjct 479761 TCTGCGCTCACGT--CAACCAGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCAT 479704 Query 23751 AGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGA 23810 ||||| || ||| |||||| || ||||| | ||||| | | ||| || || | Sbjct 479703 TGAACAAAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAA 479644 Query 23811 TGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAG 23870 |||| ||||||||||| ||||| || |||| ||| || ||||| | || || |||| Sbjct 479643 TGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACGGCAACACGCATGAGCAAGTGCTGAG 479584 Query 23871 GTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930 | | ||| | ||||||||| | || |||||||| | | || || |||| Sbjct 479583 GACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATC 479524 Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | || ||| ||||| |||||||| |||| ||| ||||| ||||| Sbjct 479523 CGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCAGAATT 479478 >seq217 Length=559249 Score = 127 bits (140), Expect = 2e-24 Identities = 170/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGC 57967 || ||||||||||| | ||| | || ||||| || | ||| | | | || ||||| Sbjct 31719 ATTGCCAAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGA-GTCAACTTTCGC 31777 Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 | | || | || |||||||| ||||| ||||| ||||| || ||| || || | Sbjct 31778 TTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTC 31837 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| | ||||| || ||||||||||| |||||||| || ||||||| |||| Sbjct 31838 CATCTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGAT 31897 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 || || |||||||||||||| ||||| || || || || ||| ||| ||||| Sbjct 31898 CTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACAT 31951 >seq125 Length=321378 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || |||||||| |||||| | || ||||| | ||| | | |||| | ||||| Sbjct 320885 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 320944 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||| || | || || |||||||||||||| || ||||||||||| Sbjct 320945 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 321004 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | || || | || | ||||||||||| ||||| || || ||||| || Sbjct 321005 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCCAC 321064 Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||| | || | ||||||| Sbjct 321065 CTGGTCCTTCGCCTCCGTGGCGGTA 321089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764271465440