Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq125 114 1e-20
seq168 87.8 2e-12
>seq125
Length=321378
Score = 114 bits (126), Expect = 1e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || ||||| |||| ||||| || || ||| |||||| | ||| | ||||
Sbjct 320885 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 320944
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||||||||| || || || || |||||||| || || |||||
Sbjct 320945 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 321004
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| |||||| | || ||||| ||||| ||||| || |||||
Sbjct 321005 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCAC 321057
Score = 113 bits (124), Expect = 4e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
||||| || |||| || || || |||| || || || || | | | |||||| | |||
Sbjct 321157 GTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTGAC 321216
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
| |||| || || || ||||||||||| ||||| ||||| || |||||||||||
Sbjct 321217 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTATC 321276
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| || ||||| ||| | || ||| || ||| | || |||||||| ||||| |||||
Sbjct 321277 TTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAAGAG 321336
Query 22411 TCCAC 22415
|||||
Sbjct 321337 TCCAC 321341
>seq168
Length=626069
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
||||||||||||||| || || || || || || || || || |||||||| ||| | ||
Sbjct 290114 AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 290055
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|||| |||||| |||| ||||||||||| || || || || |||
Sbjct 290054 GGATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACC 290009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726045903830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |