Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq217 156 8e-33 seq125 143 5e-29 seq113 129 1e-24 seq337 91.5 3e-13 >seq217 Length=559249 Score = 156 bits (172), Expect = 8e-33 Identities = 298/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 32237 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 32178 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 32177 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 32118 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||||||||||| || ||| || | ||||| Sbjct 32117 GAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTT 32058 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | ||||| || ||| |||| || || |||| || Sbjct 32057 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGC 31998 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || | | |||| || ||||| | | | || | | |||| | | || | Sbjct 31997 CTCAACAATGATGTCCTGAACCACCTTAGGATCGGGGCGGTGGTTC---ATGTGGGAGAA 31941 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 ||| || | || | |||||| |||||||| || ||| | ||||||||| || Sbjct 31940 CAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAA 31881 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 | ||| || ||||| || || || || |||||||| |||| | ||| || || || Sbjct 31880 AGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGA 31821 Query 10352 GAACAGAAGACCCTCCAC 10369 ||| | | |||||| || Sbjct 31820 GAAGAAGATACCCTCGAC 31803 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | |||| ||| |||||| Sbjct 31491 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAG 31432 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 31431 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 31372 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||| | ||| |||||||||||||||| || Sbjct 31371 TCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTG 31328 >seq125 Length=321378 Score = 143 bits (158), Expect = 5e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| ||||||||||||||||| || Sbjct 321087 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 321028 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 321027 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 320968 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | ||||||| ||||| || || |||| | || || Sbjct 320967 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTGGACTCAAC 320909 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||||||| || |||| Sbjct 320908 CTCAAGGGTGATGGTTTTGCCAGTGA 320883 Score = 143 bits (158), Expect = 5e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||||||||| || || || ||||| || Sbjct 321371 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAA 321312 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || ||||| || || | ||| |||||||| ||| Sbjct 321311 AGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 321252 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || ||||| |||| || || Sbjct 321251 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 321192 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || ||||| || |||||||| |||| Sbjct 321191 TCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 321155 >seq113 Length=217578 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 67015 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 66956 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | ||||||| ||| Sbjct 66955 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 66896 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 66895 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 66837 >seq337 Length=405033 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/208 (72%), Gaps = 14/208 (7%) Strand=Plus/Plus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGT--TCGTC 225493 ||| ||| |||||||||| ||||||||||| || || | ||| || || || Sbjct 390316 GCAGACTTCGTCAAGGAAACCAGAGTCGTGACTGACGATCA-----GACTGGTGATC-TC 390369 Query 225494 AG---GC-CCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548 || || |||| |||| | | || ||||| ||||| ||||||| |||||| | Sbjct 390370 AGTGTGCGCCTTCAGGTAC-TCCTGCAGCCACTTAACGTTTGCCACGTCCAAGTGGTTAG 390428 Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608 ||||||||||||| || || | ||||| | ||| || || || | | || ||||| Sbjct 390429 TAGGTTCGTCCAGCAGGAGCACATCAGCCTTCTGGAGCATAGCACGGGCCAAAGCCAGCT 390488 Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636 |||| |||||||| |||||||||||||| Sbjct 390489 TCATCTTCCAGCCACCGGACAGGGAGCC 390516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617999253040