Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq125 109 1e-18
seq113 109 1e-18
seq168 96.9 8e-15
seq102 95.1 3e-14
>seq125
Length=321378
Score = 109 bits (120), Expect = 1e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||||||||| ||||||||||||| ||| || || | | || | |||||
Sbjct 321072 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 321013
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| |||||||||||||| ||| ||| || || |||
Sbjct 321012 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 320953
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| || || | | || || || | ||||| ||
Sbjct 320952 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 320893
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 320892 TTGCCAGTGA 320883
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| || || ||||| || || | ||||| |||| | || | ||||||
Sbjct 321356 AGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCT 321297
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| ||||| |||||||| || ||| || || |||
Sbjct 321296 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 321237
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | ||| |||| | || || || | ||||| |||
Sbjct 321236 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTC 321177
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
|| || || || || || ||
Sbjct 321176 TTTCCAGTTAGGGTCTTAAC 321157
>seq113
Length=217578
Score = 109 bits (120), Expect = 1e-18
Identities = 147/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 199423 AAGGTGGAGAGTCGA---CT-CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTT 199478
||||| || ||||| || |||| |||| ||||||||| || || | ||||| |
Sbjct 67038 AAGGTTGAAGGTCGATCCCTACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCT 66979
Query 199479 CCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCT 199538
| |||||||||||||||||||| || ||||||||||| || ||| || || ||||
Sbjct 66978 CGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCT 66919
Query 199539 GAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCT 199598
| ||||| ||| ||| |||| |||||| | | || ||||| | || || ||||
Sbjct 66918 GGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCT 66859
Query 199599 TACCCGTGAGAGTTTTCACAAAA 199621
||||||| || || || || |||
Sbjct 66858 TACCCGTCAGGGTCTTGACGAAA 66836
>seq168
Length=626069
Score = 96.9 bits (106), Expect = 8e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| |||||| || | | ||| | |||||
Sbjct 289995 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 290054
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| || ||||||||||| ||
Sbjct 290055 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 290095
>seq102
Length=895889
Score = 95.1 bits (104), Expect = 3e-14
Identities = 168/245 (69%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| |||||||||| |||||||| ||||| ||| | |||||| | | |||| || |
Sbjct 480313 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 480254
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| || | || || || | || | | | | || || | ||||| || | |||
Sbjct 480253 CAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 480194
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
|| | ||||| || | ||||| | || | || ||||| || || || ||||| |||
Sbjct 480193 AGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAG 480134
Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007
|| |||| | || | || ||| || | |||||||||||| |||| |||||| | |||
Sbjct 480133 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCG 480074
Query 168008 TAGAA 168012
|||||
Sbjct 480073 TAGAA 480069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178915829915594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |