Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq125 86.0 5e-11
seq7 86.0 5e-11
>seq125
Length=321378
Score = 86.0 bits (94), Expect = 5e-11
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| ||||| || ||||| |||||||||||||| || || |
Sbjct 321362 AGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGA 321303
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||||||||| || || || || || ||||| | |||||| || || ||||| || ||
Sbjct 321302 CCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCC 321243
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435
|| || || || || || || ||||| ||||| | | | || ||||| ||
Sbjct 321242 TTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGAC-CTCGAGGGT 321184
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGA 563464
| ||| || ||||| || || |||||||
Sbjct 321183 GATAGTCTTTCCAGTTAGGGTCTTAACGA 321155
>seq7
Length=104645
Score = 86.0 bits (94), Expect = 5e-11
Identities = 172/255 (67%), Gaps = 0/255 (0%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
||||| ||| | |||||||| || ||||| ||||| | | ||| |||||
Sbjct 52526 GGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACCGCATTGAA 52585
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||| || || |||||| | || || || || | || |||||| || ||
Sbjct 52586 ATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCACCGACACC 52645
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177
|| | | | | |||||||| || || | |||| | | || || ||| ||| |
Sbjct 52646 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAACACTGTC 52705
Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237
|| |||||||| ||| | ||||| | | || | ||| | || ||||| ||||||
Sbjct 52706 TTCGATGCTAAGCGTCTCATTGGTCGCCGCTTCCAGGATGCTGAGGTCCAGGCCGATATG 52765
Query 550238 AAGCATTGGCCTTTC 550252
||||| |||||||||
Sbjct 52766 AAGCACTGGCCTTTC 52780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029275798117180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |