Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq125 120 2e-21
>seq125
Length=321378
Score = 120 bits (132), Expect = 2e-21
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| |||||||| ||||| || ||| ||||||| || ||
Sbjct 321366 ACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGT 321307
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||||||||| ||||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 321306 ACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCC 321247
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || ||||| ||||| ||||| ||||| | | | | | || |
Sbjct 321246 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA-CCTCGA 321188
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
|||| ||||| || || || || ||||||||||
Sbjct 321187 GGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 321155
Score = 86.0 bits (94), Expect = 4e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|||||||| | || || | ||| ||||| ||||| ||||| || |||||||| ||
Sbjct 321039 TTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 320980
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||||||||| || |||||||| || ||||| ||||| || ||||||||
Sbjct 320979 TGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCG 320920
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750
|| | |||||||| || ||||| || ||||
Sbjct 320919 CTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGA 320883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268162814166536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |