Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq102 158 4e-33
seq24 102 2e-16
seq340 84.2 6e-11
seq337 84.2 6e-11
>seq102
Length=895889
Score = 158 bits (174), Expect = 4e-33
Identities = 364/546 (67%), Gaps = 7/546 (1%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || ||||||||| ||||||||| || || || || || | |||||||||
Sbjct 480391 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 480332
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 480331 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 480272
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || ||||| |||||| | | || || || |||| | | ||| |||
Sbjct 480271 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 480212
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
||| || || | || | ||||| | | || |||||||| |||| ||| || |
Sbjct 480211 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 480154
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|| || | ||| || || || | ||| || | || |||| ||| || |
Sbjct 480153 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 480094
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
||| | ||| | ||| ||||| ||||| | || |||||| | ||||| |
Sbjct 480093 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 480034
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
||||||| || || | ||| || | ||| | || |||||||| || || ||||
Sbjct 480033 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 479974
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| ||| | |||| |||||||| || ||||| || || || || || || ||||
Sbjct 479973 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 479914
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | |
Sbjct 479913 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 479854
Query 156163 AGCGAA 156168
|||||
Sbjct 479853 CGCGAA 479848
>seq24
Length=206055
Score = 102 bits (112), Expect = 2e-16
Identities = 107/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| ||||||||| | || ||||| |||||| | |||||||||
Sbjct 112260 AGAATTTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGATGACACACCAGCA 112316
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| || ||||| || | |||||| | |||||||||||| || |||||||
Sbjct 112317 AAGTGGAAGGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 112376
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| || ||
Sbjct 112377 ACGCCGACCATTTCACCAGG 112396
>seq340
Length=440495
Score = 84.2 bits (92), Expect = 6e-11
Identities = 125/177 (71%), Gaps = 8/177 (5%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||||||||||| ||||| || |||||||| |||||||| || ||
Sbjct 263775 GCGCCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCGTCACGG 263834
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600
|| | |||||| | |||||||| || ||| | ||||||| | |||||
Sbjct 263835 GCACGACCCTCCACGGGCTGACGGGTCAGAATCTGAGTAGGACCACGAGCACGAGCG--- 263891
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| || | ||||| || |||||||||||| | | |||||| | |||
Sbjct 263892 -TGGATCTTGTCGTCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAAGAA 263947
>seq337
Length=405033
Score = 84.2 bits (92), Expect = 6e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995
|| |||||||| ||| ||| ||| || || ||||| || |||| ||||| |||
Sbjct 389279 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 389337
Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055
|| | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| |
Sbjct 389338 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 389396
Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115
| ||||| |||| || | ||| || | ||||||| || |||| || || ||||| |
Sbjct 389397 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 389456
Query 354116 CCTTCTGTCCGCCTGATAG 354134
||||||| || || || ||
Sbjct 389457 CCTTCTGACCACCGGAAAG 389475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810396372734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |