Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq102 143 3e-28
seq217 131 2e-24
seq346 118 1e-20
seq289 111 2e-18
seq324 96.9 4e-14
>seq102
Length=895889
Score = 143 bits (158), Expect = 3e-28
Identities = 291/435 (67%), Gaps = 8/435 (2%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220
||| ||| ||||| ||||||||||||| | || | ||||||||||||| ||||||
Sbjct 480387 ACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 480329
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| || |||| || ||||||| ||||||| |||| || ||||| |||| |||
Sbjct 480328 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 480269
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337
||| ||||| |||||| || | || | || |||| ||| | |||||||
Sbjct 480268 TCGAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATAGTCTTGCGGCCACGGCCCTCC 480212
Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397
|| || | | |||||| || |||||||||
Sbjct 480211 TGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGG 480152
Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457
|||||| ||||| ||||| | |||||| || || | | |||| ||| |||||
Sbjct 480151 GCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGA 480092
Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517
|| ||||||| ||||| |||||||| || || || ||||||||| |||||||||
Sbjct 480091 TCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTC 480032
Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577
|| || || || | |||| | |||||||||||||||||||||||| ||||||
Sbjct 480031 TTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAA 479972
Query 1628578 GCGCCCTTGCGCTTG 1628592
||||| |||||||
Sbjct 479971 GCGCCAGGGCGCTTG 479957
>seq217
Length=559249
Score = 131 bits (144), Expect = 2e-24
Identities = 174/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 32227 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 32168
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | |
Sbjct 32167 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC 32108
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||| |
Sbjct 32107 AGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGC 32048
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| | || || | || | | ||||| | ||| || |||||||||| || |||
Sbjct 32047 AGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATG 31988
Query 868931 AT 868932
||
Sbjct 31987 AT 31986
Score = 122 bits (134), Expect = 1e-21
Identities = 181/252 (72%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||||||||| ||| | |||| | | |||
Sbjct 31575 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATCTGG 31516
Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751
||||| | || |||| || || | ||||||||| || || |||||| |||||||||
Sbjct 31515 ACCTC-TCCACTGAAACGCTCGACAAGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAA 31457
Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808
|| ||||||||||| || |||| ||||| |||||| | | ||| |||||
Sbjct 31456 GAAGGCCAGGACGTGGGAAATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 31397
Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868
| || | ||| || | |||||| |||||||||| |||||||||||||| ||
Sbjct 31396 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTT 31337
Query 869869 GTACATCTCCCA 869880
|||||| | |||
Sbjct 31336 GTACATTTGCCA 31325
>seq346
Length=205794
Score = 118 bits (130), Expect = 1e-20
Identities = 121/157 (77%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || || || |||||| ||||||||||| | || || ||||||
Sbjct 124448 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCAGTTGGACTGGGCGAG 124507
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| || ||| | || ||| ||||| |||||| ||||| ||||| ||||||
Sbjct 124508 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCCACC 124567
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| |||||||| ||| ||| || |||| ||||
Sbjct 124568 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 124604
Score = 87.8 bits (96), Expect = 2e-11
Identities = 199/297 (67%), Gaps = 8/297 (3%)
Strand=Plus/Plus
Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180
|||||||||||| |||| || || ||| || | || ||||||||||||| |||
Sbjct 123784 GTCGGCTGCATCGTCGATGGATGCCCTCCGGGCCTAGAGCTCACCGAGGCCGACATTCAG 123843
Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240
|| || || |||||||| || ||||| |||| || | || ||||| |||||
Sbjct 123844 CCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCTCACTACCCCGCGGGACGAGAAG 123903
Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300
|| || ||| |||||||| ||||| ||| |||| |||| || ||| | || | |
Sbjct 123904 GACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGTCACTCTGGGCACACCAATTGCT 123963
Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAA------G 18354
| | || ||| |||||||| ||| ||||| || || | |||
Sbjct 123964 ATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTACGGCGGCA-GCACAATGGACCT 124022
Query 18355 GTGCCGCGGCCCT-CACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGC 18410
|| || | ||||| || ||||||| ||||||| | | |||||||| |||||||
Sbjct 124023 GTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTCGAGAAGTACGGTGTCAAGGC 124079
>seq289
Length=248146
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||| ||||| || |||||| |||| || || | || || ||| | || || |||
Sbjct 126519 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 126460
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||| ||||||||||| || |||||||||||||||||||| |||||| ||
Sbjct 126459 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 126409
>seq324
Length=451136
Score = 96.9 bits (106), Expect = 4e-14
Identities = 245/367 (67%), Gaps = 13/367 (4%)
Strand=Plus/Minus
Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744
|| || || | |||||||| | |||||| | || | || | | || |||||||||
Sbjct 98731 TGGGGGTGCGAGGCGGCGCCGATGGCGTCCACGGCAACGGTCAGGTTACCATCGGTGCCG 98672
Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804
|||||| ||||||||| | | ||| | || || | ||||||||| | ||| ||||
Sbjct 98671 TTCTTGTAGCCGATGGGGAAGGACAGGCCGGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 98612
Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCC---AAATAAGGGGCCACC 1726861
|| ||||| ||||| | |||||| || | ||| |||||| || | |||||
Sbjct 98611 GTGGTGCGGGCGCCGATCGCGCCCAGCGAGATCAGATCTGCCAGGAACTGAGGGG----- 98557
Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919
||| || | ||| | ||| ||| | ||| | || | | | | || |||
Sbjct 98556 AGATGGTGTCGAGCATCTCCGAGGCGATGGGGAG-TC--CCGTGCTGGTCAGGTCGGTGT 98500
Query 1726920 ACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGT 1726979
|||| || ||| | ||| || | | | | | | | | |||||| ||||||||
Sbjct 98499 ACAGCTTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGT 98440
Query 1726980 CGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGA 1727039
|| | ||| |||||||| ||||| || ||||| ||||| || | |||||||||||||
Sbjct 98439 CGTTAATCAGACCCTTCCAGCCGACTGTTGTGCGGGGCTTCTCCAGGTAGGCGCGCATGA 98380
Query 1727040 CCACGCA 1727046
||||||
Sbjct 98379 TCACGCA 98373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107107851291094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |