Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq102 134 2e-25 seq217 122 1e-21 seq289 105 1e-16 seq17 102 1e-15 >seq102 Length=895889 Score = 134 bits (148), Expect = 2e-25 Identities = 290/437 (66%), Gaps = 12/437 (3%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| ||| | ||| ||||||||||||| | || | || |||||||||| |||||| Sbjct 480387 ACTCGACAATCTCAGTGCACAGGTTGGAG--CTGCGAATAGTACCCAGGTTCTTCTGGTT 480330 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 || || |||| || ||||||| |||||| |||| ||| ||||| |||| || Sbjct 480329 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGC 480270 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747 | || ||||| |||| | || | || || || ||| ||||||| Sbjct 480269 CTCGAGAATGGCGTACCAGA----GCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCT 480214 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 |||| ||||| || | | |||| | || |||||||| Sbjct 480213 CCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGG 480154 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867 | |||||| || || ||||| | |||||| ||| | | | ||||| ||| || | Sbjct 480153 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 480094 Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927 | ||| ||||||| |||| ||||| || || || || ||||||||| ||||||| Sbjct 480093 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 480034 Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987 |||| ||| || || | |||| || |||||||||||||||||||||||| ||||| Sbjct 480033 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 479974 Query 2071988 AGGCGCCCTTGCGCTTG 2072004 | ||||| ||||||| Sbjct 479973 AAGCGCCAGGGCGCTTG 479957 >seq217 Length=559249 Score = 122 bits (134), Expect = 1e-21 Identities = 177/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 32235 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 32176 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 32175 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 32116 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| || ||||||| ||||||||| || ||||| Sbjct 32115 GAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCA 32056 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || | ||| || | || | | ||||| | ||| || ||||||||| Sbjct 32055 TGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCT 31996 Query 794131 CGATGATGAT 794140 | | ||||| Sbjct 31995 CAACAATGAT 31986 >seq289 Length=248146 Score = 105 bits (116), Expect = 1e-16 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||| ||||| || |||||| | ||||| || | || || |||||||| || ||| Sbjct 126519 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 126460 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | || ||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 126459 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 126409 >seq17 Length=104499 Score = 102 bits (112), Expect = 1e-15 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 24570 GTACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 24629 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || ||||| | |||||||||||| |||| | ||| || |||||| || | Sbjct 24630 GATGAGACGCACAGAGGTCTGGATCTCCCGGGAGGAGATAGTAGACTTCTTGTT-GTAAG 24688 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | ||||| | ||||||||| ||| || |||| ||||| Sbjct 24689 CGGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC 24731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916205764917698