Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28]
382 sequences; 32,356,048 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq102 134 2e-25
seq217 122 1e-21
seq289 105 1e-16
seq17 102 1e-15
>seq102
Length=895889
Score = 134 bits (148), Expect = 2e-25
Identities = 290/437 (66%), Gaps = 12/437 (3%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| ||| | ||| ||||||||||||| | || | || |||||||||| ||||||
Sbjct 480387 ACTCGACAATCTCAGTGCACAGGTTGGAG--CTGCGAATAGTACCCAGGTTCTTCTGGTT 480330
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
|| || |||| || ||||||| |||||| |||| ||| ||||| |||| ||
Sbjct 480329 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGC 480270
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747
| || ||||| |||| | || | || || || ||| |||||||
Sbjct 480269 CTCGAGAATGGCGTACCAGA----GCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCT 480214
Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807
|||| ||||| || | | |||| | || ||||||||
Sbjct 480213 CCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGG 480154
Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867
| |||||| || || ||||| | |||||| ||| | | | ||||| ||| || |
Sbjct 480153 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 480094
Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927
| ||| ||||||| |||| ||||| || || || || ||||||||| |||||||
Sbjct 480093 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 480034
Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987
|||| ||| || || | |||| || |||||||||||||||||||||||| |||||
Sbjct 480033 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 479974
Query 2071988 AGGCGCCCTTGCGCTTG 2072004
| ||||| |||||||
Sbjct 479973 AAGCGCCAGGGCGCTTG 479957
>seq217
Length=559249
Score = 122 bits (134), Expect = 1e-21
Identities = 177/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 32235 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 32176
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| ||||||| | ||| ||||||| | ||||| ||||| | ||||
Sbjct 32175 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 32116
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||||||||||| |||||||| || ||||||| ||||||||| || |||||
Sbjct 32115 GAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCA 32056
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || | ||| || | || | | ||||| | ||| || |||||||||
Sbjct 32055 TGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCT 31996
Query 794131 CGATGATGAT 794140
| | |||||
Sbjct 31995 CAACAATGAT 31986
>seq289
Length=248146
Score = 105 bits (116), Expect = 1e-16
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||| ||||| || |||||| | ||||| || | || || |||||||| || |||
Sbjct 126519 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 126460
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| || ||||||||||| || ||||| |||||||||||||| |||||| ||
Sbjct 126459 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 126409
>seq17
Length=104499
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 24570 GTACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 24629
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || ||||| | |||||||||||| |||| | ||| || |||||| || |
Sbjct 24630 GATGAGACGCACAGAGGTCTGGATCTCCCGGGAGGAGATAGTAGACTTCTTGTT-GTAAG 24688
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| || |||| |||||
Sbjct 24689 CGGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC 24731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916205764917698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |