Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq217 158 2e-32 seq102 122 1e-21 >seq217 Length=559249 Score = 158 bits (174), Expect = 2e-32 Identities = 220/303 (73%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||||||||| |||||||| |||||| | || | Sbjct 31321 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATC 31379 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 31380 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 31435 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || |||||||| ||||| || ||||||| ||| || || || ||||||||| | Sbjct 31436 ATTTCCCACGTCCTGGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 31494 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 31495 CGAGCGTTTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 31554 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || |||||||| || | ||||| Sbjct 31555 CATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTATATTAAGGA 31614 Query 1456068 CCC 1456070 || Sbjct 31615 GCC 31617 Score = 114 bits (126), Expect = 2e-19 Identities = 184/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| || |||||||||| || ||| | ||||| | | || | || || | Sbjct 31986 ATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGT 32045 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| |||||||||| ||||||| || || ||||| ||||||| Sbjct 32046 CTGCTTGGCATGAACTCCAA-GCTCATGTGCGAGTACATCGAGTTC-GTCGCTGACCGCC 32103 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 32104 TGCTGGTGGCTCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATG 32162 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 32163 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 32222 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 32223 AAGGCTGGTGTCATGGCCA 32241 >seq102 Length=895889 Score = 122 bits (134), Expect = 1e-21 Identities = 202/289 (70%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| ||||| ||| || | ||||| | || ||||||| || || | Sbjct 479661 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCCACTTTGTTCAATGCCGCTACTCCCCA 479719 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || ||| | | || ||||| ||| | ||| ||| || || || ||||| ||||| Sbjct 479720 GCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAGCATTGAGGGTATCTA 479779 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| |||||| || || | ||||||||| | || ||||| |||||| | || Sbjct 479780 TGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGCGGTATCGGTCTGAACGT 479839 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | ||||| | || | ||| | | || ||||||||| |||||||| | Sbjct 479840 CCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCAACGGCTCCTCCAACGGTAT 479899 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| || ||||| || || |||||| |||| || ||||| || |||||| Sbjct 479900 TGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAG 479948 Score = 109 bits (120), Expect = 8e-18 Identities = 295/454 (65%), Gaps = 40/454 (9%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| ||||| |||||| ||||||||| |||||||||||||| || || | | Sbjct 479957 CAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 480016 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| || ||||| || | || || || ||||| Sbjct 480017 CCTTGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTCTT 480070 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| ||||||| ||| || || ||| ||| | | | || | | |||||| | Sbjct 480071 CTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 480130 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| || || |||||| ||||||||| || ||| || | | || ||||| Sbjct 480131 ACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGACGC 480190 Query 262036 CCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGAC--- 262091 ||||| | | || ||| | |||| ||||| ||| Sbjct 480191 TCTCTACGCGAAGTACGA---------------GCAGGAGGGCCGTGGCCGCAAGACTAT 480235 Query 262092 -----------AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTA 262140 || |||||| |||||| ||| ||| || | ||||| || | |||| Sbjct 480236 CAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTT 480295 Query 262141 CATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CG 262198 |||| |||||||||| || |||| || || |||||| |||||||||| || | || Sbjct 480296 CATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG 480355 Query 262199 ACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232 ||| ||||||||||||| ||||| ||| ||| Sbjct 480356 -CAG-CTCCAACCTGTGCACTGAGATTGTCGAGT 480387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177774355397884