Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq217 93.3 6e-14 >seq217 Length=559249 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 |||||||||||| || || ||||| || | | || | ||||| || || || || Sbjct 31933 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGG 31874 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || |||||||| || ||||| || |||| || || || ||||| |||||| Sbjct 31873 CCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAG 31814 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 31813 ATACCCTCGACAGCGGCGAAGGCAACCAG 31785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905520010480