Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq102 242 4e-59 seq84 140 4e-28 >seq102 Length=895889 Score = 242 bits (268), Expect = 4e-59 Identities = 516/764 (68%), Gaps = 10/764 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || ||| | || || ||||| || ||| | | | Sbjct 479583 CCTCAGCACTTGCTCATGCGTGTTGCCGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 479642 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||| ||| |||| ||| ||| |||||||| || |||||| | || || ||||| Sbjct 479643 ATTGAGACATACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCCACTTTGTTC 479702 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || | ||| || || ||| | | ||||||||||| | ||| | ||| Sbjct 479703 AATGCCGCTACTCCCCAGCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGAC 479762 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || || ||||| || || |||||| |||||| ||||||||| | || Sbjct 479763 AGCATTGAGGGTATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGC 479822 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||||| | || || | || | || || | ||| | || || || | Sbjct 479823 GGTATCGGTCTGAACG--TCCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCA 479880 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 ||||| | || | || || || |||||||| || || || |||||||| ||||| || | Sbjct 479881 ACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATG 479940 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | ||||||||||| |||||| || | || ||||||||||| ||||||||||||| Sbjct 479941 TTGACCAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACG 480000 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 |||| | | ||||| || || ||||| ||| || ||| | || ||| | || || Sbjct 480001 CCGATGTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCC 480060 Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 ||||||| || ||| ||| |||||| ||| || ||||||||| | || ||| || Sbjct 480061 GTGACCTCTTCTAC-GCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAAC 480119 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 | || ||| || | || || |||||| ||||||||| | |||||||||||| Sbjct 480120 GGTGACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGAT 480179 Query 53777 GAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCA 53834 ||||| ||| | || || |||| |||| ||||||| | |||| ||| Sbjct 480180 GAGTTCGACGCTCTCTACGCGAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACTATCA 480237 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 |||| | || | ||| | || || ||| || ||| ||||| || | || | || Sbjct 480238 AGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCA 480297 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || |||||||||| | |||| ||||||| |||||||||||| Sbjct 480298 TGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 480341 >seq84 Length=509894 Score = 140 bits (154), Expect = 4e-28 Identities = 295/440 (67%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||||||||| || || || || |||||||||||||| |||||||| | ||| | Sbjct 355251 CCAGTTCCGATACCATCCGCGCCGTTGATCAGAATCATCGGGACGACAGGCATAAAGACC 355192 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | || ||||| | ||| | || | | | || || | Sbjct 355191 TCGGGCTCAATTTTCTTGCCATCGTCTTCGTTGTATGTTAGTAGTGGCTCATCGGCCGTA 355132 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| || || | | || | ||||||||| | |||||||||| || ||| | Sbjct 355131 TGGAAGATTTTGCGTGCAAAGGGGGACAGGCGAGTGTAGATGTAACGAGCACTGGCACAA 355072 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || || ||||| ||| || |||| || | |||||| ||||| | | ||| | ||| Sbjct 355071 TCATTACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCTAGGCAGTTGATATTG 355012 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 |||| ||| |||||| | || || | || || || || ||| | || || Sbjct 355011 TTGGAGCCAACAAAGGTCTGGGCAAGACCAACGATAGTCTGCTGAAGGGAGACGTCGCCG 354952 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 ||||| || || ||| | | || | || ||||||| | ||||||||||||| | Sbjct 354951 TGGTGGTAGGCTGTCATTCCGGATACATGACCTGCCAGCTCAACCACCTTCATGTCCTTC 354892 Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 |||| || || |||| | || |||||||||||||| ||||||| |||||| Sbjct 354891 TTCAGATTACGGCGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTTCAAACCATCG 354832 Query 117572 GCCACGTGAGGGATCGAACG 117591 | ||| |||||||||||| Sbjct 354831 ACAACGGAAGGGATCGAACG 354812 Score = 102 bits (112), Expect = 9e-17 Identities = 200/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || ||| ||||||| || | ||||| ||| || |||||| || || | ||||| Sbjct 355101 CGAGTGTAGATGTAACGAGCACTGGCACAATCATTACCACCTTGAAGTCGACTACCAAAG 355042 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||||| ||| ||||| ||||||| ||| || || |||| || | | Sbjct 355041 TTTCCACTAGGCTCTAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGGGCAAGACCA 354982 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 || || || ||| || | || |||||||| || || ||| |||| ||| || Sbjct 354981 ACGATAGTCTGCTGAAGGGAGACGTCGCCGTGGTGGTAGGCTGTCAT-TCCG-GATACAT 354924 Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263 || |||| || |||||||||||||| || |||| || || ||||| || || Sbjct 354923 GACCTGCCAGCTCAACCACCTTCATGTCCTTCTTCAGATTACGGCGGAAACAGGTGTGAA 354864 Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 |||||||||||| || |||||||| || || ||| ||| |||||||| Sbjct 354863 GCACCTTGCGCTGACCGGGCTTCAAACCATCGACAACGGAAGGGATCGAACG 354812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213387043600