Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769745.1_202014-10-28] 382 sequences; 32,356,048 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq113 138 2e-27 seq125 136 8e-27 seq168 105 1e-17 seq217 104 5e-17 >seq113 Length=217578 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 67015 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 66956 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || |||||| ||||| |||||||| || |||||||| | || ||| | ||| Sbjct 66955 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 66896 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 66895 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 66837 >seq125 Length=321378 Score = 136 bits (150), Expect = 8e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| ||||| || || ||||| |||| Sbjct 321372 ACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 321313 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || ||||| || || || || || || ||||| | |||||| ||||| || Sbjct 321312 AAGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGG 321253 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 ||| ||||||||||| |||||||| | || ||| | || || || || | |||| |||| Sbjct 321252 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTG-AGCTCTCGA 321194 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | ||||| ||||| ||||| || || | |||||||||| Sbjct 321193 CCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 321155 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| |||||||| ||||| || | ||| || ||||||||||| || || | Sbjct 321088 ACCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGA 321029 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||| || || || || || ||||| | ||| || |||||| || Sbjct 321028 AAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 320969 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| | |||||||| || | || || Sbjct 320968 AATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAAC 320909 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| || || || || Sbjct 320908 CTCAAGGGTGATGGTTTTGCCAGT 320885 >seq168 Length=626069 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || ||||||||||| || | Sbjct 289979 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 290038 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| ||||||| || || |||||| || Sbjct 290039 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 290098 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 290099 GATACCCTCCTTGTCT 290114 >seq217 Length=559249 Score = 104 bits (114), Expect = 5e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| || |||||| |||| ||| |||| | |||||||| | | |||||| Sbjct 32014 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 32073 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | | || ||||| ||||| ||||| || | | ||||| || || || |||| | Sbjct 32074 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACT 32133 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| | | |||||||||| || |||||| ||| || || || || || |||| Sbjct 32134 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 32193 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | | ||||| Sbjct 32194 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 32233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734076865828