Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1188 206 3e-48
seq1609 118 1e-21
seq588 98.7 1e-15
seq244 95.1 1e-14
>seq1188
Length=23189
Score = 206 bits (228), Expect = 3e-48
Identities = 322/455 (71%), Gaps = 4/455 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||| | ||||| || ||||||||| || | | ||| | | |||| ||| |
Sbjct 4608 AGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACTTTCGCTTCGCGTC 4667
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || |||||||| ||||||| || ||| |||||| |||| || |
Sbjct 4668 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 4727
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || ||||| ||||| |||||||||||| ||||||||| ||||| | |
Sbjct 4728 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 4787
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220
|||||||||| || ||||| |||||| |||||||| || || || || |||
Sbjct 4788 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 4847
Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280
| | | | ||| ||| ||| | || || |||| ||| |||||| |||||
Sbjct 4848 ATCCTAAGGTGGTTCA-GGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTT 4906
Query 117281 ACCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339
|| || || || || ||| ||||||| || | || | | | |||| | |||||
Sbjct 4907 ACTGACGCTCTTCC-CTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGAGTACAT 4965
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399
|||||||||||| ||| | |||||| | | || | | | ||| |||||||| | |
Sbjct 4966 CGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACTACAACGCTAC 5025
Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
|||||| | ||||| ||| | ||||||| |||
Sbjct 5026 CAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 5060
Score = 205 bits (226), Expect = 1e-47
Identities = 216/284 (76%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||
Sbjct 4204 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 4263
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | ||| |||||||| | ||||| | |||||
Sbjct 4264 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATTTCC 4323
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| ||||||||| |||||| || ||||||||||| || |||||||||
Sbjct 4324 CACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 4383
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | ||||||| || |||||||||||||| |||||| |||
Sbjct 4384 TTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 4443
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
|||||| | ||||| || | || || ||||||||||| ||
Sbjct 4444 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTA 4487
>seq1609
Length=37815
Score = 118 bits (130), Expect = 1e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | |
Sbjct 12959 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 13018
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | || || |||||||| ||| | |||||||| || ||
Sbjct 13019 GACAACG-TCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 13077
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || || | |||||||| | ||||||||||||||||||
Sbjct 13078 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 13137
Query 40878 GG 40879
||
Sbjct 13138 GG 13139
>seq588
Length=1505
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAAG 40770
|||| ||||||||||||||| | || || || ||| ||| | | | |||| |||||
Sbjct 349 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 291
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| ||||| || || | |||||||| || || |||| ||| |||
Sbjct 290 TCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGC 231
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || || | |||||||| || || |||||||| |||||| |||| ||
Sbjct 230 AAGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTC 171
Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| || || | ||| | | |||||
Sbjct 170 CACCTGGTCCTTCGCCTCCGTGGCGG 145
>seq244
Length=29022
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| ||
Sbjct 24959 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 25018
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| ||| || |||||||||||||||||| | || || || || || |
Sbjct 25019 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 25078
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 25079 CGCCTGCGTGGTGGTGG 25095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515208103466480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |