Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1188 206 3e-48 seq1609 118 1e-21 seq588 98.7 1e-15 seq244 95.1 1e-14 >seq1188 Length=23189 Score = 206 bits (228), Expect = 3e-48 Identities = 322/455 (71%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| | ||||| || ||||||||| || | | ||| | | |||| ||| | Sbjct 4608 AGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACTTTCGCTTCGCGTC 4667 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || |||||||| ||||||| || ||| |||||| |||| || | Sbjct 4668 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 4727 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||||| ||||| |||||||||||| ||||||||| ||||| | | Sbjct 4728 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 4787 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220 |||||||||| || ||||| |||||| |||||||| || || || || ||| Sbjct 4788 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 4847 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | ||| ||| ||| | || || |||| ||| |||||| ||||| Sbjct 4848 ATCCTAAGGTGGTTCA-GGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTT 4906 Query 117281 ACCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339 || || || || || ||| ||||||| || | || | | | |||| | ||||| Sbjct 4907 ACTGACGCTCTTCC-CTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGAGTACAT 4965 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||||||| ||| | |||||| | | || | | | ||| |||||||| | | Sbjct 4966 CGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACTACAACGCTAC 5025 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||||| | ||||| ||| | ||||||| ||| Sbjct 5026 CAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 5060 Score = 205 bits (226), Expect = 1e-47 Identities = 216/284 (76%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || || Sbjct 4204 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 4263 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| |||||||| | ||||| | ||||| Sbjct 4264 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATTTCC 4323 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| ||||||||| |||||| || ||||||||||| || ||||||||| Sbjct 4324 CACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 4383 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||| | ||||||| || |||||||||||||| |||||| ||| Sbjct 4384 TTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 4443 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | ||||| || | || || ||||||||||| || Sbjct 4444 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTA 4487 >seq1609 Length=37815 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 12959 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 13018 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | || || |||||||| ||| | |||||||| || || Sbjct 13019 GACAACG-TCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 13077 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 13078 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 13137 Query 40878 GG 40879 || Sbjct 13138 GG 13139 >seq588 Length=1505 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAAG 40770 |||| ||||||||||||||| | || || || ||| ||| | | | |||| ||||| Sbjct 349 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 291 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| || || | |||||||| || || |||| ||| ||| Sbjct 290 TCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGC 231 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | |||||||| || || |||||||| |||||| |||| || Sbjct 230 AAGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTC 171 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || || | ||| | | ||||| Sbjct 170 CACCTGGTCCTTCGCCTCCGTGGCGG 145 >seq244 Length=29022 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 24959 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 25018 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| ||| || |||||||||||||||||| | || || || || || | Sbjct 25019 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 25078 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 25079 CGCCTGCGTGGTGGTGG 25095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208103466480