Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq346 356 2e-93 seq1188 127 2e-24 seq588 95.1 1e-14 >seq346 Length=34350 Score = 356 bits (394), Expect = 2e-93 Identities = 1195/1846 (65%), Gaps = 24/1846 (1%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||| |||||||||||||| || || || || Sbjct 16172 TGGTACGCAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCGGCGAAGTGCATGC 16113 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 || | || || | ||| | || || | |||| ||||| |||||||| Sbjct 16112 TGGTGAGCTTGCCCATGGTAGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGA 16053 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | | || || || || |||||||| | | | | ||| || || ||||| |||| Sbjct 16052 TGTAGGCACCGCGGTCAGCGGCCATCTGCAGGATGTTGCGCTGTGAGATCTCCCAGACGG 15993 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 |||||||||| | |||| || || || ||| |||||||||| ||| || Sbjct 15992 TCTTGTACAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGACGGAGCCGCCAT 15933 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 | ||||| || || || | ||| ||||| ||||| | || || || || | Sbjct 15932 CGGCGATGATGCGGTTCTTCATATTGTCGGACCACAGACCGAGGTCGACCAGGTCCTTCA 15873 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || | |||| || || || ||||| || | || ||| ||||| ||| ||||| | Sbjct 15872 GGAGCCAAGGGTTAACGACCTGGAACTCACCAGCCAGGACACGGCGGGAGTAGATGTTCG 15813 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | |||||||| | || ||| ||||| || ||| ||| || || |||| Sbjct 15812 AGGTGTAGGGTTCGAAGCACTCGTTGAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCA 15753 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCG 22622 | || || | ||| || ||| | | || || | ||| || ||| || | Sbjct 15752 TGGGGGCGACCAGCAGACTGTTGCGGACACCAGACTCGGCAATCTTGGCCTTCAGGGAGG 15693 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC-- 22680 ||||||||| ||||||| || || ||||||||| ||||| |||| | ||| Sbjct 15692 CCCAGTCCCAGAGATCGGTGGGGGTGCG---GTCCCACATGTCGTACTGCAGGATGCCCT 15636 Query 22681 GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA 22740 |||| || || ||| |||| || || || | |||| || ||||| ||||| Sbjct 15635 GCGAGACG--GGAGAGCCGGCGTAGGTCTCATATGTACCAAGCTTCTTGGCAATCTCGCA 15578 Query 22741 GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC 22800 | || ||| || |||| || || ||||||||||| | |||| | | || Sbjct 15577 GGAAGCAGTCAAGGCACCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGCTGTCTAGC 15518 Query 22801 GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCC 22860 || | ||| | |||| ||||| || ||| || || || | ||| | || || Sbjct 15517 CTCGGGGGAGTCGAATGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACC 15458 Query 22861 TATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATT 22920 | | | || || |||| | || | || || || || | || || | || Sbjct 15457 GAGAGCAATGGGGCGGTGACGGAAGTTGCTCTTCTTCGCTTCAGGAACGGGGTAGTAGTT 15398 Query 22921 CGAATCGATTGTTCTGTTCAAGTTTCTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNT 22979 ||| || | |||||| ||| || | | || | | | Sbjct 15397 GATATCAATGATCTTGTTCAGGTTG-TGAACGAGAACCTGCACGACCTCGTGGAGCTTGC 15339 Query 22980 CAAAGTCGTAAACGCC-CG---ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGA 23035 ||||||| || |||| || | || ||||| | || || ||||| || || || Sbjct 15338 CAAAGTCATACTCGCCTCGGGCAGAGT-CAACATAAGTGGGGAGGGCGAGGGAAGCCAGG 15280 Query 23036 TTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTA 23095 ||||| || |||||||| || || ||||||| ||||| || || || || ||| Sbjct 15279 TTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCACAGGTTGGAG 15220 Query 23096 CACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGC 23155 | || || |||| || ||||||| || || ||||| | ||||||||||||| Sbjct 15219 CTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGC 15160 Query 23156 ATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCG 23215 ||| | || | || ||||| ||| | ||||| || || ||| | ||||||| Sbjct 15159 ATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCC 15100 Query 23216 TGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274 | | | ||| || | | ||| || | ||||||||| ||| | ||||| || || Sbjct 15099 TTGATA-GTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTC 15041 Query 23275 GGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTG 23333 ||||||| ||| || ||||||||||| | | | ||||| | ||| |||| Sbjct 15040 ATCACCGTAGACA-TCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGTCCAGTCAC 14982 Query 23334 AGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGC 23393 || |||||||| |||| || ||||| || |||| | ||||||||| || || | Sbjct 14981 CGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCAC 14922 Query 23394 GGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCG 23453 |||| || |||||||| || ||| |||||| || ||| | || || || || || | Sbjct 14921 GGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCAAGGAACTCGAAGACATCGG 14862 Query 23454 CATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGA 23513 | ||||||||||| ||||| | |||||| ||||| || | ||| || || ||||| || | Sbjct 14861 CGTGCCACGGCTCCAGGTAGATGGCAAAAGCGCCAGGGCGCTTGTTACCACCCTGGTCAA 14802 Query 23514 CGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGC 23573 | || ||||| |||||||| |||| | ||||| || || | ||||||||| | |||| Sbjct 14801 CATAGCGGGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCG- 14743 Query 23574 CTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCT 23632 | || ||| | |||||| | || |||| | ||| |||| | ||| || || Sbjct 14742 TTGGTTCCACCAATGTACGAACCGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCG 14683 Query 23633 CCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTG 23692 || | | || || ||||| || || || |||||||| ||||| ||||| |||||| Sbjct 14682 CCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTG 14623 Query 23693 TC--CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCG 23750 || | || || | |||| ||| || || | | || | | ||| |||||||| Sbjct 14622 TCTGCGCTCACGT--CAACCAGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCAT 14565 Query 23751 AGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGA 23810 ||||| || ||| |||||| || ||||| | ||||| | | ||| || || | Sbjct 14564 TGAACAAAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAA 14505 Query 23811 TGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAG 23870 |||| ||||||||||| ||||| || |||| ||| || ||||| | || || |||| Sbjct 14504 TGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACGGCAACACGCATGAGCAAGTGCTGAG 14445 Query 23871 GTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930 | | ||| | ||||||||| | || |||||||| | | || || |||| Sbjct 14444 GACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATC 14385 Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | || ||| ||||| |||||||| |||| ||| ||||| ||||| Sbjct 14384 CGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCAGAATT 14339 >seq1188 Length=23189 Score = 127 bits (140), Expect = 2e-24 Identities = 170/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGC 57967 || ||||||||||| | ||| | || ||||| || | ||| | | | || ||||| Sbjct 4601 ATTGCCAAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGA-GTCAACTTTCGC 4659 Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 | | || | || |||||||| ||||| ||||| ||||| || ||| || || | Sbjct 4660 TTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTC 4719 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| | ||||| || ||||||||||| |||||||| || ||||||| |||| Sbjct 4720 CATCTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGAT 4779 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 || || |||||||||||||| ||||| || || || || ||| ||| ||||| Sbjct 4780 CTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACAT 4833 >seq588 Length=1505 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || |||||||| |||||| | || ||||| | ||| | | |||| | ||||| Sbjct 347 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 288 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||| || | || || |||||||||||||| || ||||||||||| Sbjct 287 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 228 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | || || | || | ||||||||||| ||||| || || ||||| || Sbjct 227 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCCAC 168 Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||| | || | ||||||| Sbjct 167 CTGGTCCTTCGCCTCCGTGGCGGTA 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445756799306160